Research Output 1970 2020

Filter
Review article
2019

A continuing career in Biocatalysis: Frances H. Arnold

Fasan, R., Kan, S. B. J. & Zhao, H., Jan 1 2019, (Accepted/In press) In : ACS Catalysis.

Research output: Contribution to journalReview article

Enzymes
Biocatalysts
Catalysis
Biocatalysis

Advancing point-of-care diagnostics of metabolites through engineering semisynthetic proteins

Zhang, J. J. & Lu, Y., Apr 2019, In : Clinical Chemistry. 65, 4, p. 507-509 3 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Protein Engineering
Metabolites
Proteins

Bioapplications of DNA nanotechnology at the solid-liquid interface

Wang, W., Yu, S., Huang, S., Bi, S., Han, H., Zhang, J. R., Lu, Y. & Zhu, J. J., Sep 21 2019, In : Chemical Society Reviews. 48, 18, p. 4892-4920 29 p.

Research output: Contribution to journalReview article

Nanotechnology
DNA
Liquids
Cell membranes
Nanoparticles

Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation

Muller, M. P., Jiang, T., Sun, C., Lihan, M., Pant, S., Mahinthichaichan, P., Trifan, A. & Tajkhorshid, E., May 8 2019, In : Chemical reviews. 119, 9, p. 6086-6161 76 p.

Research output: Contribution to journalReview article

Membrane Proteins
Modulation
Lipids
Proteins
Molecular dynamics

Coatings for biodegradable magnesium-based supports for therapy of vascular disease: A general view

Echeverry-Rendon, M., Allain, J. P., Robledo, S. M., Echeverria, F. & Harmsen, M. C., Sep 2019, In : Materials Science and Engineering C. 102, p. 150-163 14 p.

Research output: Contribution to journalReview article

Magnesium
magnesium
Biocompatible Materials
therapy
Biomaterials

Discovery of and Insights into DNA “Codes” for Tunable Morphologies of Metal Nanoparticles

Satyavolu, N. S. R., Loh, K. Y., Tan, L. H. & Lu, Y., Jun 26 2019, In : Small. 15, 26, 1900975.

Research output: Contribution to journalReview article

Metal Nanoparticles
Metal nanoparticles
DNA
Nanoparticles
Nanostructures

Emerging class of omega-3 fatty acid endocannabinoids & their derivatives

Watson, J. E., Kim, J. S. & Das, A., Aug 2019, In : Prostaglandins and Other Lipid Mediators. 143, 106337.

Research output: Contribution to journalReview article

Endocannabinoids
Omega-3 Fatty Acids
Derivatives
Cannabinoid Receptors
Dopamine

Exploring the Fundamental Structures of Life: Non-Targeted, Chemical Analysis of Single Cells and Subcellular Structures

Neumann, E. K., Do, T. D., Comi, T. J. & Sweedler, J. V., Jul 8 2019, In : Angewandte Chemie - International Edition. 58, 28, p. 9348-9364 17 p.

Research output: Contribution to journalReview article

Chemical analysis
Throughput
Imaging techniques
Data storage equipment

Investigating brain d-serine: Advocacy for good practices

Mothet, J. P., Billard, J. M., Pollegioni, L., Coyle, J. T. & Sweedler, J. V., May 2019, In : Acta Physiologica. 226, 1, e13257.

Research output: Contribution to journalReview article

Serine
Amino Acids
Brain
Molecular Models
Practice Guidelines

Metal-Dependent DNAzymes for the Quantitative Detection of Metal Ions in Living Cells: Recent Progress, Current Challenges, and Latest Results on FRET Ratiometric Sensors

Hwang, K., Mou, Q., Lake, R. J., Xiong, M., Holland, B. & Lu, Y., Oct 21 2019, In : Inorganic Chemistry. 58, 20, p. 13696-13708 13 p.

Research output: Contribution to journalReview article

Catalytic DNA
Energy transfer
Metal ions
metal ions
Metals

Molecular Engineering of Functional Nucleic Acid Nanomaterials toward In Vivo Applications

Zhang, J. J., Lan, T. & Lu, Y., Mar 21 2019, In : Advanced Healthcare Materials. 8, 6, 1801158.

Research output: Contribution to journalReview article

Nanostructures
Nucleic acids
Nanostructured materials
Nucleic Acids
Point-of-Care Systems

Production of biofuels and chemicals from xylose using native and engineered yeast strains

Kwak, S., Jo, J. H., Yun, E. J., Jin, Y-S. & Seo, J. H., Mar 1 2019, In : Biotechnology Advances. 37, 2, p. 271-283 13 p.

Research output: Contribution to journalReview article

Xylose
Biofuels
Yeast
Yeasts
Coenzymes

Reactive oxygen species-responsive drug delivery systems for the treatment of neurodegenerative diseases

Ballance, W. C., Qin, E. C., Chung, H. J., Gillette, M. L. & Kong, H. J., Oct 2019, In : Biomaterials. 217, 119292.

Research output: Contribution to journalReview article

Neurodegenerative diseases
Drug Delivery Systems
Neurodegenerative Diseases
Reactive Oxygen Species
Oxygen

Recent progress in nanomaterials for nucleic acid delivery in cancer immunotherapy

Mei, Y., Wang, R., Jiang, W., Bo, Y., Zhang, T., Yu, J., Cheng, M., Wu, Y., Cheng, J. & Ma, W., Jul 2019, In : Biomaterials Science. 7, 7, p. 2640-2651 12 p.

Research output: Contribution to journalReview article

Nucleic acids
RNA
Nanostructured materials
Nucleic Acids
Small Interfering RNA

Skeletal Muscle Adaptations and Passive Muscle Stiffness in Cerebral Palsy: A Literature Review and Conceptual Model

Tisha, A. L., Armstrong, A. A., Wagoner Johnson, A. J. & Lopez-Ortiz, C., Feb 2019, In : Journal of Applied Biomechanics. 35, 1, p. 68-79 12 p.

Research output: Contribution to journalReview article

Cerebral Palsy
Skeletal Muscle
Muscles
Physiological Adaptation
Sarcomeres

Supramolecular nanotheranostics

Chen, X., Zheng, G., Cheng, J. & Yang, Y. Y., Jan 1 2019, In : Theranostics. 9, 11, p. 3014-3016 3 p.

Research output: Contribution to journalReview article

Open Access
Research

The bare necessities: Uncovering essential and condition-critical genes with transposon sequencing

Shields, R. C. & Jensen, P. A., Apr 2019, In : Molecular Oral Microbiology. 34, 2, p. 39-50 12 p.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Microbial Interactions
Bacteria
Bacterial Genomes
Biological Phenomena

Translating human cancer sequences into personalized porcine cancer models

Xu, C., Wu, S., Schook, L. B. & Schachtschneider, K. M., Jan 1 2019, In : Frontiers in Oncology. 9, FEB, 00105.

Research output: Contribution to journalReview article

Open Access
Swine
Neoplasms
Precision Medicine
Mutation
Technology
Fluorescence microscopy
Fluorescence Microscopy
Epigenomics
Molecules
Gene expression
2018

Advancing Metabolic Engineering of Saccharomyces cerevisiae Using the CRISPR/Cas System

Lian, J., HamediRad, M. & Zhao, H., Sep 2018, In : Biotechnology Journal. 13, 9, 1700601.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Metabolic Engineering
Saccharomyces cerevisiae
Gene Knockout Techniques
Biotechnology

A new era for electron bifurcation

Peters, J. W., Beratan, D. N., Bothner, B., Dyer, R. B., Harwood, C. S., Heiden, Z. M., Hille, R., Jones, A. K., King, P. W., Lu, Y., Lubner, C. E., Minteer, S. D., Mulder, D. W., Raugei, S., Schut, G. J., Seefeldt, L. C., Tokmina-Lukaszewska, M., Zadvornyy, O. A., Zhang, P. & Adams, M. WW., Dec 2018, In : Current Opinion in Chemical Biology. 47, p. 32-38 7 p.

Research output: Contribution to journalReview article

Electrons
Biochemical Phenomena
Anaerobiosis
Electron Transport Complex III
Redox reactions

Biocatalysis for the synthesis of pharmaceuticals and pharmaceutical intermediates

Sun, H., Zhang, H., Ang, E. L. & Zhao, H., Apr 1 2018, In : Bioorganic and Medicinal Chemistry. 26, 7, p. 1275-1284 10 p.

Research output: Contribution to journalReview article

Biocatalysis
Enzymes
Pharmaceutical Preparations
Oxidoreductases
Protein Engineering

Bioengineered Liver Models for Drug Testing and Cell Differentiation Studies

Underhill, G. H. & Khetani, S. R., Mar 2018, In : CMGH. 5, 3, p. 426-439.e1

Research output: Contribution to journalReview article

Cell Differentiation
Liver
Pharmaceutical Preparations
Hepatocytes
Cell- and Tissue-Based Therapy

Biophysics of Tumor Microenvironment and Cancer Metastasis - A Mini Review

Emon, B., Bauer, J., Jain, Y., Jung, B. & Saif, M. T. A., Jan 1 2018, In : Computational and Structural Biotechnology Journal. 16, p. 279-287 9 p.

Research output: Contribution to journalReview article

Biophysics
Tumor Microenvironment
Tumors
Cells
Neoplasm Metastasis

Bioprocess engineering for biohythane production from low-grade waste biomass: technical challenges towards scale up

Liu, Z., Si, B., Li, J., He, J., Zhang, C., Lu, Y., Zhang, Y. & Xing, X. H., Apr 2018, In : Current Opinion in Biotechnology. 50, p. 25-31 7 p.

Research output: Contribution to journalReview article

Biomass
Fermentation
Biological Phenomena
Biofuels
Biogas

Bone regeneration strategies: Engineered scaffolds, bioactive molecules and stem cells current stage and future perspectives

Ho-Shui-Ling, A., Bolander, J., Rustom, L. E., Wagoner Johnson, A. J., Luyten, F. P. & Picart, C., Oct 2018, In : Biomaterials. 180, p. 143-162 20 p.

Research output: Contribution to journalReview article

Bone Substitutes
Bone Regeneration
Stem cells
Scaffolds
Bone

Breaking the Axial Diffraction Limit: A Guide to Axial Super-Resolution Fluorescence Microscopy

Liu, W., Toussaint, K. C., Okoro, C., Zhu, D., Chen, Y., Kuang, C. & Liu, X., Aug 2018, In : Laser and Photonics Reviews. 12, 8, 1700333.

Research output: Contribution to journalReview article

Fluorescence microscopy
Diffraction
microscopy
fluorescence
diffraction

CAMP, Ca2+, pHi, and NO Regulate H-like Cation Channels That Underlie Feeding and Locomotion in the Predatory Sea Slug Pleurobranchaea californica

Green, D. J., Huang, R. C., Sudlow, L., Hatcher, N., Potgieter, K., McCrohan, C., Lee, C., Romanova, E. V., Sweedler, J. V., Gillette, M. L. & Gillette, R., Aug 15 2018, In : ACS Chemical Neuroscience. 9, 8, p. 1986-1993 8 p.

Research output: Contribution to journalReview article

Pleurobranchaea
Gastropoda
Locomotion
Nitric Oxide Synthase
Oceans and Seas

Cell-Extracellular Matrix Mechanobiology: Forceful Tools and Emerging Needs for Basic and Translational Research

Holle, A. W., Young, J. L., Van Vliet, K. J., Kamm, R. D., Discher, D., Janmey, P., Spatz, J. P. & Saif, T., Jan 10 2018, In : Unknown Journal. 18, 1, p. 1-8 8 p.

Research output: Contribution to journalReview article

emerging
Mechanics
cues
Signal transduction
Neurology

Circadian redox rhythms in the regulation of neuronal excitability

Bothwell, M. Y. & Gillette, M. L., May 1 2018, In : Free Radical Biology and Medicine. 119, p. 45-55 11 p.

Research output: Contribution to journalReview article

Circadian Rhythm
Oxidation-Reduction
Suprachiasmatic Nucleus
Membranes
Ion Channels

Detection and digital resolution counting of nanoparticles with optical resonators and applications in biosensing

Aguirre, M. Á., Long, K. D., Li, N., Manoto, S. L. & Cunningham, B. T., Jun 1 2018, In : Chemosensors. 6, 2, 13.

Research output: Contribution to journalReview article

Optical resonators
optical resonators
counting
Nanoparticles
nanoparticles

Editorial: Building strategies for porcine cancer models

Collares, T., Seixas, F. K., Rund, L. A. & Schook, L. B., Oct 2 2018, In : Frontiers in Genetics. 9, OCT, 377.

Research output: Contribution to journalReview article

Swine
Neoplasms

Emergence of two near-infrared windows for in vivo and intraoperative SERS

Lane, L. A., Xue, R. & Nie, S., Aug 2018, In : Current Opinion in Chemical Biology. 45, p. 95-103 9 p.

Research output: Contribution to journalReview article

Raman Spectrum Analysis
Raman scattering
Tissue
Infrared radiation
Light

Engineering Polymersomes for Diagnostics and Therapy

Leong, J., Teo, J. Y., Aakalu, V. K., Yang, Y. Y. & Kong, H. J., Apr 25 2018, In : Advanced Healthcare Materials. 7, 8, 1701276.

Research output: Contribution to journalReview article

Imaging techniques
Molecules
Controllability
Pharmaceutical Preparations
Self assembly

Engineering the Surface of Therapeutic "living" Cells

Park, J., Andrade, B., Seo, Y., Kim, M. J., Zimmerman, S. C. & Kong, H. J., Feb 28 2018, In : Chemical reviews. 118, 4, p. 1664-1690 27 p.

Research output: Contribution to journalReview article

Cell engineering
Drug Carriers
Adhesion
Tissue
Nanoparticles
Biocatalysis
Enzymes
Synthetic Biology
Metabolic engineering
Metabolic Engineering

Gasification of biowaste: A critical review and outlooks

Watson, J., Zhang, Y., Si, B., Chen, W. T. & de Souza, R., Mar 2018, In : Renewable and Sustainable Energy Reviews. 83, p. 1-17 17 p.

Research output: Contribution to journalReview article

Gasification
Steam
Gas heating
Tar
Gases

Infrared Spectroscopic Imaging Advances as an Analytical Technology for Biomedical Sciences

Wrobel, T. P. & Bhargava, R., Feb 6 2018, In : Analytical chemistry. 90, 3, p. 1444-1463 20 p.

Research output: Contribution to journalReview article

Infrared Spectrophotometry
Biomedical Technology
Biomedical Research
Light

Innovations in CRISPR technology

Brooks, A. K. & Gaj, T., Aug 2018, In : Current Opinion in Biotechnology. 52, p. 95-101 7 p.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Innovation
Technology
Genes
Gene therapy

Microscopic view of lipids and their diverse biological functions

Wen, P. C., Mahinthichaichan, P., Trebesch, N., Jiang, T., Zhao, Z., Shinn, E., Wang, Y., Shekhar, M., Kapoor, K., Chan, C. K. & Tajkhorshid, E., Aug 2018, In : Current Opinion in Structural Biology. 51, p. 177-186 10 p.

Research output: Contribution to journalReview article

Lipids
Membranes
Physiological Phenomena
Lipid Bilayers
Hydrodynamics

Of Mice, Dogs, Pigs, and Men: Choosing the Appropriate Model for Immuno-Oncology Research

Overgaard, N. H., Fan, T. M., Schachtschneider, K. M., Principe, D. R., Schook, L. B. & Jungersen, G., Dec 31 2018, In : ILAR Journal. 59, 3, p. 247-262 16 p.

Research output: Contribution to journalReview article

Oncology
Tumors
Swine
Dogs
swine

Plasmonic nano-arrays for ultrasensitive bio-sensing

Jiang, J., Wang, X., Li, S., Ding, F., Li, N., Meng, S., Li, R., Qi, J., Liu, Q. & Liu, G. L., Jan 1 2018, In : Nanophotonics. 7, 9, p. 1517-1531 15 p.

Research output: Contribution to journalReview article

Surface Plasmon Resonance
Surface plasmon resonance
surface plasmon resonance
Sensor arrays
Point-of-Care Systems

Point-of-care sensors for the management of sepsis

Reddy, B., Hassan, U., Seymour, C., Angus, D. C., Isbell, T. S., White, K., Weir, W., Yeh, L., Vincent, A. & Bashir, R., Sep 1 2018, In : Nature biomedical engineering. 2, 9, p. 640-648 9 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Sepsis
Health
Sensors
Infection

Potential lymphangiogenesis therapies: Learning from current antiangiogenesis therapies—A review

Yamakawa, M., Doh, S. J., Santosa, S. M., Montana, M., Qin, E. C., Kong, H. J., Han, K. Y., Yu, C., Rosenblatt, M. I., Kazlauskas, A., Chang, J. H. & Azar, D. T., Nov 2018, In : Medicinal Research Reviews. 38, 6, p. 1769-1798 30 p.

Research output: Contribution to journalReview article

Lymphangiogenesis
Learning
Pharmaceutical Preparations
Vascular Endothelial Growth Factor C
Nanotechnology

Quantitative phase imaging in biomedicine

Park, Y. K., Depeursinge, C. & Popescu, G., Oct 1 2018, In : Nature Photonics. 12, 10, p. 578-589 12 p.

Research output: Contribution to journalReview article

Imaging techniques
commercialization
optical paths
microscopy
Photobleaching

Recent advances in metabolic engineering of Saccharomyces cerevisiae: New tools and their applications

Lian, J., Mishra, S. & Zhao, H., Nov 2018, In : Metabolic Engineering. 50, p. 85-108 24 p.

Research output: Contribution to journalReview article

Metabolic engineering
Metabolic Engineering
Yeast
Saccharomyces cerevisiae
Clustered Regularly Interspaced Short Palindromic Repeats

Recent developments in the application of P450 based biocatalysts

Wei, Y., Ang, E. L. & Zhao, H., Apr 2018, In : Current Opinion in Chemical Biology. 43, p. 1-7 7 p.

Research output: Contribution to journalReview article

Mixed Function Oxygenases
Enzymes
Biosynthesis
Biological Products
Cytochrome P-450 Enzyme System

Reconstitution and substrate specificity for isopentenyl pyrophosphate of the antiviral radical SAM enzyme viperin

Chakravarti, A., Selvadurai, K., Shahoei, R., Lee, H., Fatma, S., Tajkhorshid, E. & Huang, R. H., Jan 1 2018, In : Journal of Biological Chemistry. 293, 36, p. 14122-14133 12 p.

Research output: Contribution to journalReview article

Substrate Specificity
Antiviral Agents
Substrates
Enzymes
Mevalonic Acid

Secondary structures in synthetic polypeptides from N-carboxyanhydrides: design, modulation, association, and material applications

Song, Z., Fu, H., Wang, R., Pacheco, L. A., Wang, X., Lin, Y. & Cheng, J., Oct 7 2018, In : Chemical Society Reviews. 47, 19, p. 7401-7425 25 p.

Research output: Contribution to journalReview article

Modulation
Association reactions
Peptides
Conformations
Polymers