Research Output 1970 2019

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2019

13C-lutein is differentially distributed in tissues of an adult female rhesus macaque following a single oral administration: a pilot study

Jeon, S., Li, Q., Rubakhin, S., Sweedler, J. V., Smith, J. W., Neuringer, M., Kuchan, M. & Erdman, J. W., Jan 1 2019, In : Nutrition Research. 61, p. 102-108 7 p.

Research output: Contribution to journalArticle

Lutein
Macaca mulatta
Oral Administration
Tissue Distribution
Haplorhini

3D-Printed Hydrogel Composites for Predictive Temporal (4D) Cellular Organizations and Patterned Biogenic Mineralization

McCracken, J. M., Rauzan, B. M., Kjellman, J. C. E., Kandel, M. E., Liu, Y. H., Badea, A., Miller, L. A., Rogers, S., Popescu, G. & Nuzzo, R. G., Jan 10 2019, In : Advanced Healthcare Materials. 8, 1, 1800788.

Research output: Contribution to journalArticle

Ink
Hydrogel
Hydrogels
Scaffolds
Organizations

A clinical trial of intraoperative near-infrared imaging to assess tumor extent and identify residual disease during anterior mediastinal tumor resection

Predina, J. D., Keating, J., Newton, A., Corbett, C., Xia, L., Shin, M., Frenzel Sulyok, L., Deshpande, C., Litzky, L., Nie, S., Kucharczuk, J. C. & Singhal, S., Mar 1 2019, In : Cancer. 125, 5, p. 807-817 11 p.

Research output: Contribution to journalArticle

Clinical Trials
Indocyanine Green
Neoplasms
Phrenic Nerve
Thymoma

A comparison of mid-infrared spectral regions on accuracy of tissue classification

Mittal, S. & Bhargava, R., Apr 21 2019, In : Analyst. 144, 8, p. 2635-2642 8 p.

Research output: Contribution to journalArticle

Dermatoglyphics
Tissue
Infrared radiation
Pixels
Breast

Activation of silent biosynthetic gene clusters using transcription factor decoys

Wang, B., Guo, F., Dong, S. H. & Zhao, H., Feb 1 2019, In : Nature chemical biology. 15, 2, p. 111-114 4 p.

Research output: Contribution to journalArticle

Multigene Family
Transcription Factors
Oxazoles
Peptide Synthases
Polyketide Synthases

A fully automated, faster noise rejection approach to increasing the analytical capability of chemical imaging for digital histopathology

Gupta, S., Mittal, S., Kajdacsy-Balla, A., Bhargava, R. & Bajaj, C., Apr 1 2019, In : PloS one. 14, 4, e0205219.

Research output: Contribution to journalArticle

Open Access
histopathology
Noise
image analysis
Imaging techniques
Signal to noise ratio

Allosteric Interactions in Human Cytochrome P450 CYP3A4: The Role of Phenylalanine 213

Denisov, I. G., Grinkova, Y. V., Nandigrami, P., Shekhar, M., Tajkhorshid, E. & Sligar, S., Mar 12 2019, In : Biochemistry. 58, 10, p. 1411-1422 12 p.

Research output: Contribution to journalArticle

Cytochrome P-450 CYP3A
Phenylalanine
Cytochrome P-450 Enzyme System
Progesterone
Carbamazepine

Anaerobic conversion of the hydrothermal liquefaction aqueous phase: Fate of organics and intensification with granule activated carbon/ozone pretreatment

Si, B., Yang, L., Zhou, X., Watson, J., Tommaso, G., Chen, W. T., Liao, Q., Duan, N., Liu, Z. & Zhang, Y., Jan 1 2019, In : Green Chemistry. 21, 6, p. 1305-1318 14 p.

Research output: Contribution to journalArticle

Ozone
Liquefaction
liquefaction
Activated carbon
activated carbon

Analysis of Paper-Based Colorimetric Assays with a Smartphone Spectrometer

Woodburn, E. V., Long, K. D. & Cunningham, B. T., Jan 15 2019, In : IEEE Sensors Journal. 19, 2, p. 508-514 7 p., 8494768.

Research output: Contribution to journalArticle

Smartphones
Spectrometers
Assays
strip
Cameras

Anomalous scaling of flexural phonon damping in nanoresonators with confined fluid

De, S. & Aluru, N. R., Dec 1 2019, In : Microsystems and Nanoengineering. 5, 1, 2.

Research output: Contribution to journalArticle

Damping
damping
scaling
Fluids
fluids

A novel technique for in situ uniaxial tests of self-assembled soft biomaterials

Elhebeary, M., Emon, M. A. B., Aydin, O. & Saif, M. T. A., Jan 1 2019, In : Lab on a Chip. 19, 7, p. 1153-1161 9 p.

Research output: Contribution to journalArticle

Biocompatible Materials
Biomaterials
Tissue
Collagen
Electric Stimulation

Aqueous acid-based synthesis of lead-free tin halide perovskites with near-unity photoluminescence quantum efficiency

Wang, A., Guo, Y., Zhou, Z., Niu, X., Wang, Y., Muhammad, F., Li, H., Zhang, T., Wang, J., Nie, S. & Deng, Z., Jan 1 2019, In : Chemical Science. 10, 17, p. 4573-4579 7 p.

Research output: Contribution to journalArticle

Open Access
Tin
Quantum efficiency
Photoluminescence
Acids
Quantum yield

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-casanovas, N., Kantola, I. B., Bernacchi, C. J., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access
maize
corn
vapor pressure
water
water use efficiency

Automated sensorless single-shot closed-loop adaptive optics microscopy with feedback from computational adaptive optics

Iyer, R. R., Liu, Y. Z. & Boppart, S. A., Apr 29 2019, In : Optics Express. 27, 9, p. 12998-13014 17 p.

Research output: Contribution to journalArticle

adaptive optics
shot
microscopy
deformable mirrors
aberration

Automatic curation of sports highlights using multimodal excitement features

Merler, M., Mac, K. N. C., Joshi, D., Nguyen, Q. B., Hammer, S., Kent, J., Xiong, J., Do, M. N., Smith, J. R. & Feris, R. S., May 1 2019, In : IEEE Transactions on Multimedia. 21, 5, p. 1147-1160 14 p., 8491305.

Research output: Contribution to journalArticle

Reels
Sports
Electric fuses
Metadata
Classifiers

Balancing biofunctional and biomechanical properties using porous titanium reinforced by carbon nanotubes

Pavón, J. J., López, D., Mondragón, F., Gallego, J., Arias, S. L., Luitjohan, K., Holybee, B., Torres, Y., Rodríguez, J. A., Echeverry-Rendón, M., Civantos, A. & Allain, J. P., Apr 1 2019, In : Journal of Biomedical Materials Research - Part A. 107, 4, p. 719-731 13 p.

Research output: Contribution to journalArticle

Carbon Nanotubes
Titanium
Carbon nanotubes
Strength of materials
Nanocomposites

Biochemical and structural investigation of sulfoacetaldehyde reductase from Klebsiella oxytoca

Zhou, Y., Wei, Y., Lin, L., Xu, T., Ang, E. L., Zhao, H., Yuchi, Z. & Zhang, Y., Jan 1 2019, In : Biochemical Journal. 476, 4, p. 733-746 14 p.

Research output: Contribution to journalArticle

Klebsiella oxytoca
Oxidoreductases
Taurine
NADP
Tail

Biohybrid valveless pump-bot powered by engineered skeletal muscle

Li, Z., Seo, Y., Aydin, O., Elhebeary, M., Kamm, R. D., Kong, H. J. & Taher Saif, M. A., Jan 29 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 5, p. 1543-1548 6 p.

Research output: Contribution to journalArticle

Hydrogel
Skeletal Muscle
Muscles
Microfluidics
Muscle Contraction

Biohythane production of post-hydrothermal liquefaction wastewater: A comparison of two-stage fermentation and catalytic hydrothermal gasification

Si, B., Watson, J., Aierzhati, A., Yang, L., Liu, Z. & Zhang, Y., Feb 1 2019, In : Bioresource Technology. p. 335-342 8 p.

Research output: Contribution to journalArticle

Liquefaction
Gasification
liquefaction
Fermentation
fermentation

Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Jan 1 2019, In : GCB Bioenergy.

Research output: Contribution to journalArticle

Open Access
Miscanthus giganteus
Miscanthus sinensis
germplasm
Biomass
biomass
Yeast
yeast
ethanol
Ethanol
maize

Biosynthetic Routes for Producing Various Fucosyl-Oligosaccharides

Yun, E. J., Liu, J. J., Lee, J. W., Kwak, S., Yu, S., Kim, K. H. & Jin, Y-S., Feb 15 2019, In : ACS synthetic biology. 8, 2, p. 415-424 10 p.

Research output: Contribution to journalArticle

Oligosaccharides
Fucose
Guanosine Diphosphate Fucose
Prebiotics
Sugars

Blind Gain and Phase Calibration via Sparse Spectral Methods

Li, Y., Lee, K. & Bresler, Y., May 1 2019, In : IEEE Transactions on Information Theory. 65, 5, p. 3097-3123 27 p., 8550743.

Research output: Contribution to journalArticle

Calibration
regime
Sensor arrays
Synthetic aperture radar
Inverse problems

Bounding multivariate trigonometric polynomials

Pfister, L. & Bresler, Y., Feb 1 2019, In : IEEE Transactions on Signal Processing. 67, 3, p. 700-707 8 p., 8552451.

Research output: Contribution to journalArticle

Polynomials
Control theory

BSD2 is a Rubisco-specific assembly chaperone, forms intermediary hetero-oligomeric complexes, and is nonlimiting to growth in tobacco

Conlan, B., Birch, R., Kelso, C., Holland, S., De Souza, A. P., Long, S. P., Beck, J. L. & Whitney, S. M., Apr 1 2019, In : Plant Cell and Environment. 42, 4, p. 1287-1301 15 p.

Research output: Contribution to journalArticle

Ribulose-Bisphosphate Carboxylase
ribulose-bisphosphate carboxylase
Tobacco
tobacco
Growth

Bulk Protein and Oil Prediction in Soybeans Using Transmission Raman Spectroscopy: A Comparison of Approaches to Optimize Accuracy

Singh, R., Wrobel, T. P., Mukherjee, P., Gryka, M., Kole, M., Harrison, S. & Bhargava, R., Jun 1 2019, In : Applied Spectroscopy. 73, 6, p. 687-697 11 p.

Research output: Contribution to journalArticle

soybeans
Raman spectroscopy
Oils
oils
proteins

Bulk-state and single-particle imaging are central to understanding carbon dot photo-physics and elucidating the effects of precursor composition and reaction temperature

Fathi, P., Khamo, J. S., Huang, X., Srivastava, I., Esch, M. B., Zhang, K. & Pan, D., Apr 1 2019, In : Carbon. 145, p. 572-585 14 p.

Research output: Contribution to journalArticle

Carbon
Physics
Imaging techniques
Chemical analysis
Temperature

Bundle sheath chloroplast volume can house sufficient Rubisco to avoid limiting C4 photosynthesis during chilling

Pignon, C. P., Lundgren, M. R., Osborne, C. P. & Long, S. P., Jan 1 2019, In : Journal of experimental botany. 70, 1, p. 357-365 9 p.

Research output: Contribution to journalArticle

Ribulose-Bisphosphate Carboxylase
C4 photosynthesis
Photosynthesis
ribulose-bisphosphate carboxylase
Chloroplasts

Cancer Cells Invade Confined Microchannels via a Self-Directed Mesenchymal-to-Amoeboid Transition

Holle, A. W., Govindan Kutty Devi, N., Clar, K., Fan, A., Saif, M. T. A., Kemkemer, R. & Spatz, J. P., Apr 10 2019, In : Nano Letters. 19, 4, p. 2280-2290 11 p.

Research output: Contribution to journalArticle

microchannels
Microchannels
cancer
Cells
matrices

Characterization and thermal decomposition of demineralized wastewater algae biomass

Carpio, R. B., Zhang, Y., Kuo, C. T., Chen, W. T., Schideman, L. C. & de Leon, R. L., Mar 1 2019, In : Algal Research. 38, 101399.

Research output: Contribution to journalArticle

algae
thermal degradation
wastewater
formic acid
leaching

Characterization of Cas proteins for CRISPR-Cas editing in streptomycetes

Yeo, W. L., Heng, E., Tan, L. L., Lim, Y. W., Lim, Y. H., Hoon, S., Zhao, H., Zhang, M. M. & Wong, F. T., Jan 1 2019, In : Biotechnology and bioengineering.

Research output: Contribution to journalArticle

Clustered Regularly Interspaced Short Palindromic Repeats
CRISPR-Cas Systems
Genes
Streptococcus thermophilus
Francisella tularensis
Microspheres
Nanoparticles
Imaging techniques
nanoparticles
magnetic resonance

Characterization of the flavin monooxygenase involved in biosynthesis of the antimalarial FR-900098

Nguyen, K., DeSieno, M. A., Bae, B., Johannes, T. W., Cobb, R. E., Zhao, H. & Nair, S. K., Jan 1 2019, In : Organic and Biomolecular Chemistry. 17, 6, p. 1506-1518 13 p.

Research output: Contribution to journalArticle

dimethylaniline monooxygenase (N-oxide forming)
Flavin-Adenine Dinucleotide
biosynthesis
Biosynthesis
Antimalarials

Characterization of the Lipid Structure and Fluidity of Lipid Membranes on Epitaxial Graphene and Their Correlation to Graphene Features

Farell, M., Wetherington, M., Shankla, M., Chae, I., Subramanian, S., Kim, S. H., Aksimentiev, A., Robinson, J. & Kumar, M., Apr 2 2019, In : Langmuir. 35, 13, p. 4726-4735 10 p.

Research output: Contribution to journalArticle

Graphite
Fluidity
Membrane Lipids
Graphene
Lipids

Characterizing Fatty Liver in vivo in Rabbits, Using Quantitative Ultrasound

Nguyen, T. N., Podkowa, A. S., Tam, A. Y., Arnold, E. C., Miller, R. J., Park, T. H., Do, M. N. & Oelze, M. L., Aug 1 2019, In : Ultrasound in Medicine and Biology. 45, 8, p. 2049-2062 14 p.

Research output: Contribution to journalArticle

rabbits
Fatty Liver
liver
Rabbits
fats

Cilostamide affects in a concentration and exposure time-dependent manner the viability and the kinetics of in vitro maturation of caprine and bovine oocytes

Correia, H. H. V., Vieira, L. A., Mielgo, C. M., Paes, V. M., Alves, B. G., Silva, J. R. V., Wheeler, M. B., Rodrigues, A. P. R. & Figueiredo, J. R., Feb 1 2019, In : Research in Veterinary Science. 122, p. 22-28 7 p.

Research output: Contribution to journalArticle

Oocytes
exposure duration
oocytes
goats
viability

Circadian rhythm of redox state regulates membrane excitability in hippocampal CA1 neurons

Naseri Kouzehgarani, G., Bothwell, M. Y. & Gillette, M. L., Jan 1 2019, (Accepted/In press) In : European Journal of Neuroscience.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Circadian Rhythm
Oxidation-Reduction
Neurons
Membranes

Cluster Expansion Framework for the Sr(Ti 1-x Fe x )O 3-x/2 (0 < x < 1) Mixed Ionic Electronic Conductor: Properties Based on Realistic Configurations

Ouyang, B., Chakraborty, T., Kim, N., Perry, N. H., Mueller, T., Aluru, N. R. & Ertekin, E., May 14 2019, In : Chemistry of Materials. 31, 9, p. 3144-3153 10 p.

Research output: Contribution to journalArticle

Oxygen vacancies
Stoichiometry
Perovskite
Electronic structure
Solid solutions

Co-electrolysis of CO2 and glycerol as a pathway to carbon chemicals with improved technoeconomics due to low electricity consumption

Verma, S., Lu, S. & Kenis, P. J. A., Jun 1 2019, In : Nature Energy. 4, 6, p. 466-474 9 p.

Research output: Contribution to journalArticle

Glycerol
Electrolysis
Carbon
Electricity
Oxygen

Cognitive and neural architecture of decision making competence

Román, F. J., Colom, R., Hillman, C. H., Kramer, A. F., Cohen, N. J. & Barbey, A. K., Oct 1 2019, In : NeuroImage. 199, p. 172-183 12 p.

Research output: Contribution to journalArticle

Mental Competency
Decision Making
Intelligence
Individuality
Vocabulary

Combined ∆ 9 -tetrahydrocannabinol and moderate alcohol administration: effects on ingestive behaviors in adolescent male rats

Nelson, N. G., Law, W. X., Weingarten, M. J., Carnevale, L. N., Das, A. & Liang, N-C., Feb 14 2019, In : Psychopharmacology. 236, 2, p. 671-684 14 p.

Research output: Contribution to journalArticle

Adolescent Behavior
Dronabinol
Alcohols
Alcohol Drinking
Saccharin

Comparative global metabolite profiling of xylose-fermenting Saccharomyces cerevisiae SR8 and Scheffersomyces stipitis

Shin, M., Kim, J. W., Ye, S., Kim, S., Jeong, D., Lee, D. Y., Kim, J. N., Jin, Y-S., Kim, K. H. & Kim, S. R., Jul 4 2019, In : Applied Microbiology and Biotechnology. 103, 13, p. 5435-5446 12 p.

Research output: Contribution to journalArticle

Xylose
Saccharomyces cerevisiae
Ethanol
Fermentation
Xylulose
Phylogeny
Joining
Scalability
Large Data Sets
Polynomials

Controlled dissolution of freeform 3D printed carbohydrate glass scaffolds in hydrogels using a hydrophobic spray coating

Gryka, M. C., Comi, T. J., Forsyth, R. A., Hadley, P. M., Deb, S. & Bhargava, R., Mar 1 2019, In : Additive Manufacturing. 26, p. 193-201 9 p.

Research output: Contribution to journalArticle

Hydrogels
Carbohydrates
Scaffolds
Dissolution
Glass

Counting growth factors in single cells with infrared quantum dots to measure discrete stimulation distributions

Le, P., Lim, S. J., Baculis, B. C., Chung, H. J., Kilian, K. A. & Smith, A. M., Dec 1 2019, In : Nature communications. 10, 1, 909.

Research output: Contribution to journalArticle

Open Access
Quantum Dots
stimulation
Semiconductor quantum dots
Intercellular Signaling Peptides and Proteins
counting

Critical Knowledge Gaps in Mass Transport through Single-Digit Nanopores: A Review and Perspective

Faucher, S., Aluru, N. R., Bazant, M. Z., Blankschtein, D., Brozena, A. H., Cumings, J., Pedro De Souza, J., Elimelech, M., Epsztein, R., Fourkas, J. T., Rajan, A. G., Kulik, H. J., Levy, A., Majumdar, A., Martin, C., McEldrew, M., Misra, R. P., Noy, A., Pham, T. A., Reed, M. & 4 othersSchwegler, E., Siwy, Z., Wang, Y. & Strano, M., Jan 1 2019, In : Journal of Physical Chemistry C.

Research output: Contribution to journalArticle

Gas permeable membranes
air purification
Air purification
Nanopores
digits

Cytometric fingerprinting and machine learning (CFML): A novel label-free, objective method for routine mastitis screening

Dhoble, A. S., Ryan, K. T., Lahiri, P., Chen, M., Pang, X., Cardoso, F. & Bhalerao, K., Jul 1 2019, In : Computers and Electronics in Agriculture. 162, p. 505-513 9 p.

Research output: Contribution to journalArticle

artificial intelligence
milk
mastitis
Learning systems
Labels

Data-driven elasticity imaging using cartesian neural network constitutive models and the autoprogressive method

Hoerig, C., Ghaboussi, J. & Insana, M., May 1 2019, In : IEEE Transactions on Medical Imaging. 38, 5, p. 1150-1160 11 p., 8522049.

Research output: Contribution to journalArticle

Neural Networks (Computer)
Elasticity
Constitutive models
Neural networks
Imaging techniques
Open Access
Helium
Tungsten
titanium carbides
Titanium carbide
Surface morphology

Deep learning for FTIR histology: leveraging spatial and spectral features with convolutional neural networks

Berisha, S., Lotfollahi, M., Jahanipour, J., Gurcan, I., Walsh, M., Bhargava, R., Van Nguyen, H. & Mayerich, D., Mar 7 2019, In : Analyst. 144, 5, p. 1642-1653 12 p.

Research output: Contribution to journalArticle

Histology
histology
Fourier Analysis
Fourier transform
Fourier transforms