Bioengineering &ndash; Research Output

Conference contribution

Photonic crystal optical limiting filter

Yang, F., Yen, G. & Cunningham, B. T., 2008, 2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS. 4551862

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Photonic crystals

Liquid Crystals

Azobenzene

Molding

Liquid crystals

Photonic crystal optofluidics for high throughput biosensing

Choi, C. J. & Cunningham, B. T., 2008, Conference on Lasers and Electro-Optics, CLEO 2008. Optical Society of America

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Photonic crystals

Throughput

photonics

reflectance

Microfluidics

Photonic crystal optofluidics for high throughput biosensing

Choi, C. J. & Cunningham, B. T., Sep 15 2008, 2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS. 4551017. (2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Photonic crystals

Throughput

Microfluidics

Labels

Tuning

Photonic crystal resonant coupling to nanoantennas and applications for digital resolution biosensing

Cunningham, B. T., Liu, J. N., Huang, Q., Canady, T., Long, K. D., Li, N., Pastor, M. A., Kwon, L., Liu, K. K. & Singamaneni, S., Jan 1 2018, Microscopy Histopathology and Analytics, MICROSCOPY 2018. OSA - The Optical Society, Vol. Part F89-MICROSCOPY 2018.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Photonic crystals

Biomarkers

Pathogens

Tumor Biomarkers

MicroRNAs

Photonic crystals: A platform for label-free and enhanced fluorescence biomolecular and cellular assays

Cunningham, B. T., Chan, L., Mathias, P. C., Ganesh, N., George, S., Lidstone, E., Heeres, J. & Hergenrother, P. J., Dec 1 2008, Materials for Optical Sensors in Biomedical Applications. p. 43-52 10 p. (Materials Research Society Symposium Proceedings; vol. 1133).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Photonic crystals

Labels

Assays

platforms

Fluorescence

Photonic crystals: A versatile platform for optics-based biological detection

Cunningham, B. T., Mar 19 2012, Silicon Photonics VII. 826609. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8266).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Photonic crystals

Photonic Crystal

Optics

platforms

photonics

Photonic crystals utilized for label-free and amplified fluorescence biodetection

Cunningham, B. T., Jun 2 2008, Micro (MEMS) and Nanotechnologies for Space, Defense, and Security II. 695910. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6959).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Pathogens

Photonic crystals

Labels

Fluorescence

photonics

Photonic resonator outcoupler microscopy (PROM) for quantitative monitoring of stem cell focal adhesion area

Zhuo, Y., Choi, J. S., Marin, T., Yu, H., Harley, B. A. & Cunningham, B. T., Jan 1 2018, Frontiers in Optics, FIO 2018. OSA - The Optical Society, Vol. Part F114-FIO 2018.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Stem cells

Photonics

Resonators

Microscopic examination

Adhesion

Picoliter Droplet Generation for Fast Monitoring the Brain Chemistry with Scaled Silicon Nanodyalisis Probe

Zhang, Y., Esters, A., Bi, O. & Vlasov, Y. A., Jun 2019, 2019 20th International Conference on Solid-State Sensors, Actuators and Microsystems and Eurosensors XXXIII, TRANSDUCERS 2019 and EUROSENSORS XXXIII. Institute of Electrical and Electronics Engineers Inc., p. 209-212 4 p. 8808797. (2019 20th International Conference on Solid-State Sensors, Actuators and Microsystems and Eurosensors XXXIII, TRANSDUCERS 2019 and EUROSENSORS XXXIII).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Silicon

Droplet

Chemistry

brain

Brain

Piezoresistive microcantilevers from ultrananocrystalline diamond

Privorotskaya, N. L., Zeng, H., Carlisle, J. A., Bashir, R. & King, W. P., Jan 1 2010, 2010 Solid-State Sensors, Actuators, and Microsystems Workshop. Monk, D. J. & Turner, K. L. (eds.). Transducer Research Foundation, p. 250-253 4 p. (Technical Digest - Solid-State Sensors, Actuators, and Microsystems Workshop).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Diamonds

Boron

Temperature

Acoustic impedance

Microsystems

Plasmon-enhanced optical trapping of individual metal nanorods

Pelton, M., Liu, M., Toussaint, K. C., Kim, H. Y., Smith, G., Pesic, J., Guyot-Sionnest, P. & Scherer, N. F., Dec 1 2007, Optical Trapping and Optical Micromanipulation IV. 66441C. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6644).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Nanorods

nanorods

trapped particles

trapping

Lasers

Plasmonic coupling of SiO₂-Ag "post-cap" nanostructures and silver film for surface-enhanced Raman scattering

Wu, H. Y. & Cunningham, B. T., 2011, CLEO: Science and Innovations, CLEO_SI 2011.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

caps

Raman scattering

Nanostructures

Silver

silver

Plasmonic coupling of SiO₂-Ag post-cap nanostructures and silver film for surface-enhanced Raman scattering

Wu, H. Y. & Cunningham, B. T., Sep 1 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5950146. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Silver

caps

Raman scattering

Nanostructures

silver

Plasmonic nanogap-enhanced raman scattering using a resonant nanodome array

Wu, H. Y., Choi, C. J. & Cunningham, B. T., 2012, CLEO: Science and Innovations, CLEO_SI 2012.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Raman scattering

Metabolites

Optical properties

Substrates

Plasmonic nanogap-enhanced Raman scattering using a resonant nanodome array

Wu, H. Y., Choi, C. J. & Cunningham, B. T., Dec 6 2012, 2012 Conference on Lasers and Electro-Optics, CLEO 2012. 6325721. (2012 Conference on Lasers and Electro-Optics, CLEO 2012).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Raman scattering

Metabolites

Optical properties

Substrates

Plasmonic nanotweezers based on au bowtie nanoantenna arrays for manipulation of nano-to-macroscopic objects

Toussaint, K. C. & Roxworthy, B. J., Jan 1 2013, Optical Trapping and Optical Micromanipulation X. SPIE, 88100U. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8810).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Plasmonics

Manipulation

manipulators

Nanostructures

trapping

Plasmonic nanotweezers for applications in life sciences

Roxworthy, B. J. & Toussaint, K. J., Nov 21 2013, Optical Trapping Applications, OTA 2013. (Optical Trapping Applications, OTA 2013).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

life sciences

Biological Science Disciplines

Microspheres

Photons

continuous radiation

Plasmon-resonant gold nanorods provide spectroscopic OCT contrast in excised human breast tumors

Oldenburg, A. L., Hansen, M. N., Wei, A. & Boppart, S. A., Apr 21 2008, Molecular Probes for Biomedical Applications II. 68670E. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6867).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Optical tomography

Nanorods

Tumors

Gold

Tissue

Plastic-based distributed feedback laser biosensors in microplate format

Tan, Y., Ge, C., Chu, A., Lu, M. & Cunningham, B. T., Dec 1 2011, IEEE Photonic Society 24th Annual Meeting, PHO 2011. p. 423-424 2 p. 6110607. (IEEE Photonic Society 24th Annual Meeting, PHO 2011).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

distributed feedback lasers

bioinstrumentation

format

standard deviation

plastics

Plastic distributed feedback laser biosensor

Lu, M., Choi, S. S. & Cunningham, B. T., Dec 1 2008, 21st Annual Meeting of the IEEE Lasers and Electro-Optics Society, LEOS 2008. p. 169-170 2 p. 4688542. (Conference Proceedings - Lasers and Electro-Optics Society Annual Meeting-LEOS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Distributed feedback lasers

Biosensors

Plastics

Point-of-care detection and real-time monitoring of intravenously delivered drugs via tubing with an integrated SERS sensor

Wu, H. Y. & Cunningham, B. T., 2013, Laser Science, LS 2013. Optical Society of America

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Tubing

drugs

Monitoring

plastic flow

sensors

Polarimetric interferometric synthetic aperture microscopy: Vectorial computed imaging from optical coherence tomography data

Davis, B. J., Ralston, T. S., Marks, D. L., Boppart, S. A. & Scott Carney, P., Jan 1 2007, Computational Optical Sensing and Imaging, COSI 2007. Optical Society of America, (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Synthetic apertures

synthetic apertures

Optical tomography

image reconstruction

Microscopic examination

Polarization controlled output of electrohydrodynamic jet printed quantum dot embedded photonic crystals for display applications

See, G. G., Xu, L., Sutanto, E., Alleyne, A. G., Nuzzo, R. G. & Cunningham, B. T., Nov 9 2015, 2015 IEEE Photonics Conference, IPC 2015. Institute of Electrical and Electronics Engineers Inc., p. 180-181 2 p. 7323533. (2015 IEEE Photonics Conference, IPC 2015).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Electrohydrodynamics

Photonic crystals

Semiconductor quantum dots

Display devices

Polarization

Polymorph and crystal habit screening on a microfluidic platform

Thorson, M. R., Goyal, S., Zhang, G. G. Z., Gong, Y., Zukoski, C. F. & Kenis, P. J. A., Jan 1 2011, Separations Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, Vol. 2. p. 1033-1034 2 p.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Polymorphism

Microfluidics

habits

Screening

Crystals

Porous photonic crystal external cavity laser biosensor for drug screening

Huang, Q., Peh, J., Hergenrother, P. J. & Cunningham, B. T., Jan 5 2017, IEEE Sensors, SENSORS 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7808619. (Proceedings of IEEE Sensors).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Laser resonators

Photonic crystals

Biosensors

Screening

Wavelength

Portable pneumatic power-harvesting ankle-foot-orthosis

Chin, R., Hsiao-Wecksler, E. T., Loth, E., Alleyne, A., Manwaring, S., Shorter, K. A., Tyson, S. N. & Kogler, G., Dec 1 2009, Proceedings of the ASME Summer Bioengineering Conference, SBC2008. PART A ed. p. 411-412 2 p. (Proceedings of the ASME Summer Bioengineering Conference, SBC2008; no. PART A).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Pneumatics

Portable real-time optical coherence tomography system for intraoperative imaging and staging of breast cancer

Nguyen, F. T., Zysk, A. M., Kotynek, J. G., Bellafiore, F. J., Rowland, K. M., Johnson, P. A., Eric Chaney, J. & Boppart, S. A., Apr 30 2007, Advanced Biomedical and Clinical Diagnostic Systems V. 64300H. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6430).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Optical tomography

Tumors

Imaging techniques

Cells

Galvanometers

Power limiting characteristics of a plasma-loaded evanescent-mode cavity resonator

Semnani, A., Yang, H. J., Sinanis, M., Park, S. J., Eden, J. G., Macheret, S. O. & Peroulis, D., 2016, European Microwave Week 2016: "Microwaves Everywhere", EuMW 2016 - Conference Proceedings; 46th European Microwave Conference, EuMC 2016. Institute of Electrical and Electronics Engineers Inc., p. 627-630 4 p. 7824421

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Plasma jets

Cavity resonators

cavity resonators

plasma jets

breakdown

Practical protocols for fast histopathology by Fourier transform infrared spectroscopic imaging

Keith, F. N., Reddy, R. K. & Bhargava, R., Apr 21 2008, Biomedical Optical Spectroscopy. 685306. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6853).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Fourier transforms

Tissue

Infrared radiation

Imaging techniques

Michelson interferometers

Preparing female engineering doctoral students for the Academic Job Market through a training program inspired by peer review

Li, Y., Mai, D. J., Horstman, E. & Bhargava, R., 2015, 122nd ASEE Annual Conference and Exposition: Making Value for Society. American Society for Engineering Education

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Students

Primary care imaging using optical coherence tomography for advanced point-of-care diagnostics

Boppart, S. A., Dec 1 2012, Frontiers in Optics, FIO 2012. (Frontiers in Optics, FIO 2012).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

magnification

screening

tomography

illumination

Probabilistic low-rank subspace clustering

Babacan, S. D., Nakajima, S. & Do, M. N., Dec 1 2012, Advances in Neural Information Processing Systems 25: 26th Annual Conference on Neural Information Processing Systems 2012, NIPS 2012. p. 2744-2752 9 p. (Advances in Neural Information Processing Systems; vol. 4).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Factorization

Probing chemical messengers in a small nervous system with mass spectrometry

Li, L., Kelley, W. P., Pulver, S. R., Sweedler, J. V. & Marder, E., 2002, Proceedings - 50th ASMS Conference on Mass Spectrometry and Allied Topics. p. 393-394 2 p.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Peptide Hormones

Neurology

Mass spectrometry

Centrifugation

Molecular weight

Production approaches for microbubbles loaded with nanoparticles

Gauthier, M., Yin, Q., Cheng, J. & O'Brien, W. D., Dec 1 2013, 2013 IEEE International Ultrasonics Symposium, IUS 2013. p. 1521-1524 4 p. 6724797. (IEEE International Ultrasonics Symposium, IUS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

nanoparticles

albumins

serums

analysis of variance

embedding

Prostate cancer diagnosis using quantitative phase imaging and machine learning algorithms

Nguyen, T. H., Sridharan, S., Macias, V., Balla, A. K., Do, M. N. & Popescu, G., Jan 1 2015, Quantitative Phase Imaging. Park, Y. & Popescu, G. (eds.). SPIE, 933619. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9336).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

machine learning

Learning algorithms

learning

Learning systems

Prostatic Neoplasms

Protein-protein binding detection with nanoparticle photonic crystal enhanced microscopy (NP-PCEM)

Zhuo, Y., Tian, L., Chen, W., Yu, H., Singamaneni, S. & Cunningham, B. T., Nov 2 2014, 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014. Institute of Electrical and Electronics Engineers Inc., p. 2069-2072 4 p. 6944023. (2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Optics and Photonics

Photonic crystals

Protein Binding

Nanoparticles

Microscopy

Protocol for obtaining noise-immune absolute ellipsometric measurements with high spatial resolution

Tripathi, S. & Toussaint, K. C., Jan 1 2009, Frontiers in Optics, FiO 2009. Optical Society of America, (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

spatial resolution

scalars

high resolution

PSAR: Measuring multiple sequence alignment reliability by probabilistic sampling (Extended abstract)

Kim, J. & Ma, J., Apr 4 2011, Research in Computational Molecular Biology - 15th Annual International Conference, RECOMB 2011, Proceedings. p. 134-135 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6577 LNBI).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Multiple Sequence Alignment

Alignment

Sampling

Comparative Genomics

Unknown

PSF model-based reconstruction with sparsity constraint algorithm and application to real-time cardiac MRI

Zhao, B., Haldar, J. P. & Liang, Z-P., Dec 1 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC'10. p. 3390-3393 4 p. 5627934. (2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC'10).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Magnetic resonance imaging

Image reconstruction

Inverse problems

Computer-Assisted Image Processing

Imaging techniques

Pulse width effect on Rb₂ predissociation by negatively chirped femtosecond laser pulses

Xiao, Y., Gao, J. & Eden, J. G., Jan 1 2006, Frontiers in Optics, FiO 2006. Optical Society of America, (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Ultrashort pulses

Excited states

Laser pulses

pulse duration

pulses

Pulse width effect on Rb₂ predissociation by negatively chirped femtosecond laser pulses

Xiao, Y., Gao, J. & Eden, J. G., 2006, Organic Photonics and Electronics, OPE 2006. Optical Society of America

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Ultrashort pulses

Excited states

Laser pulses

pulse duration

pulses

Pulse width effect on Rb₂ predissociation by negatively chirped femtosecond laser pulses

Xiao, Y., Gao, J. & Eden, J. G., 2006, Optical Fabrication and Testing, OFT 2006. Optical Society of America

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Ultrashort pulses

Excited states

Laser pulses

pulse duration

pulses

Pulse width effect on Rb₂ predissociation by negatively chirped femtosecond laser pulses

Xiao, Y., Gao, J. & Eden, J. G., 2006, Laser Science, LS 2006. Optical Society of America

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Ultrashort pulses

Excited states

Laser pulses

pulse duration

pulses

QPI for prostate cancer diagnosis: Quantitative separation of Gleason grades 3 and 4

Sridharan, S., Macias, V., Tangella, K., Kajdacsy-Balla, A. & Popescu, G., Jan 1 2015, Quantitative Phase Imaging. Park, Y. & Popescu, G. (eds.). SPIE, 93361U. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9336).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Biopsy

grade

Prostatic Neoplasms

Anisotropy

cancer

Quantification of rat cervical microstructure using fourier transform-second-harmonic generation imaging

Lau, T. Y., Sangha, H. K., Chien, E. K., McFarlin, B. L., Johnson, A. J. W. & Toussaint, K. C., 2013, 2013 Conference on Lasers and Electro-Optics, CLEO 2013. IEEE Computer Society, 6833015

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Harmonic generation

Rats

Fourier transforms

Tissue

Imaging techniques

Quantification of rat cervical microstructure using fourier transform-second-harmonic generation imaging

Lau, T. Y., Sangha, H. K., Chien, E. K., McFarlin, B. L., Johnson, A. J. W. & Toussaint, K. C., 2013, Conference on Lasers and Electro Optics, CLEO: Applications and Technology, CLEO_AT 2013.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Harmonic generation

rats

Rats

harmonic generations

Fourier transforms

Quantification of ventilation effectiveness for air quality control in animal buildings

Jerez, S. B., Wang, X. & Zhang, Y., Jan 1 2014, ASHRAE Transactions - ASHRAE Winter Conference. PART 1 ed. Amer. Soc. Heating, Ref. Air-Conditoning Eng. Inc., p. 460-468 9 p. (ASHRAE Transactions; vol. 120, no. PART 1).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Air quality

Ventilation

Quality control

Animals

Impurities

Quantifying complexity and variability of gait phase portraits

DiBerardino, L. A., Polk, J. D., Rosengren, K. S. & Hsiao-Wecksler, E. T., Dec 1 2009, Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009. PART B ed. p. 863-864 2 p. (Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009; no. PART B).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Gait

Quantifying the contractile behavior of individual fibroblasts within three-dimensional collagen scaffolds: A cellular solids approach

Harley, B. A. & Gibson, L. J., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Fibroblasts

Scaffolds (biology)

Collagen

Scaffolds

Quantitative analysis of biological tissues using Fourier transform-second-harmonic generation imaging

Ambekar Ramachandra Rao, R., Mehta, M. R. & Toussaint, K. C., May 7 2010, Multiphoton Microscopy in the Biomedical Sciences X. 75692G. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7569).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Fourier Analysis

Harmonic generation

Trachea

Cornea

quantitative analysis