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Conference contribution

New absolute fast converging phylogeny estimation methods with improved scalability and accuracy

Zhang, Q., Rao, S. & Warnow, T., Aug 1 2018, 18th International Workshop on Algorithms in Bioinformatics, WABI 2018. Parida, L. & Ukkonen, E. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 8. (Leibniz International Proceedings in Informatics, LIPIcs; vol. 113).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

New blockwise permutation tests preserving exchangeability in functional neuroimaging

Zhou, C. & Wang, Y. M., Jan 1 2009, Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009. IEEE Computer Society, p. 6977-6980 4 p. 5333853. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

New Divide-and-Conquer Techniques for Large-Scale Phylogenetic Estimation

Warnow, T., Jan 1 2019, Algorithms for Computational Biology - 6th International Conference, AlCoB 2019, Proceedings. Vega-Rodríguez, M. A., Holmes, I. & Martín-Vide, C. (eds.). Springer-Verlag Berlin Heidelberg, p. 3-21 19 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11488 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

New insights into cadherin biology using cadherin tethered PEG-surfaces and micropatterning

Hakanson, M., Ochsner, M., Anderegg, F., Smith, M., Grandin, M., Leckband, D., Vogel, V. & Textor, M., Dec 1 2008, 8th World Biomaterials Congress 2008. 1 p. (8th World Biomaterials Congress 2008; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

New paradigm for optimal multiparameter image visualization

Boesel, R. W. & Bresler, Y., 1992, Proceedings of SPIE - The International Society for Optical Engineering. Publ by Int Soc for Optical Engineering, Vol. 1808. p. 347-361 15 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

NJMerge: A Generic technique for scaling phylogeny estimation methods and its application to species trees

Molloy, E. K. & Warnow, T., Jan 1 2018, Comparative Genomics - 16th International Conference, RECOMB-CG 2018, Proceedings. Ouangraoua, A. & Blanchette, M. (eds.). Springer-Verlag Berlin Heidelberg, p. 260-276 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11183 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Noise performance of fast hierarchical 3D backprojection for helical cone-beam tomography

Brokish, J. & Bresler, Y., Dec 1 2005, 2005 IEEE Nuclear Science Symposium Conference Record -Nuclear Science Symposium and Medical Imaging Conference. p. 1860-1862 3 p. 1596693. (IEEE Nuclear Science Symposium Conference Record; vol. 4).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Non-contact characterization of crack damage in concrete using ultrasonic backscatter from surface waves

Oelze, M. L., Ham, S. & Popovics, J. S., Nov 1 2016, 2016 IEEE International Ultrasonics Symposium, IUS 2016. IEEE Computer Society, 7728707. (IEEE International Ultrasonics Symposium, IUS; vol. 2016-November).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Noncontact coating of spherical-shell targets using gas-dynamic levitation and charged liquid cluster beam

Kim, K., Feng, Q. & Ryu, C. K., Dec 1 1995, Proceedings - Symposium on Fusion Engineering. IEEE, Vol. 1. p. 82-85 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Non-interferometric generation of vector beams

Tripathi, S. & Toussaint, K. C., Dec 1 2011, Frontiers in Optics, FiO 2011. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Non-iterative dixon decomposition of fat and water

Jacob, M. & Sutton, B. P., Nov 27 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 1356-1359 4 p. 4193546. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nonlinear dynamic study of a bistable MEMS beam toggled by optical actuation

Sulfridge, M., Saif, T. & Miller, N., Jan 1 2002, Microelectromechanical Systems. American Society of Mechanical Engineers (ASME), p. 117-120 4 p. (ASME International Mechanical Engineering Congress and Exposition, Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nonlinear interferometric vibrational imaging: A method for distinguishing coherent anti-stokes Raman scattering from nonresonant four-wave-mixing processes and retrieving Raman spectra using broadband pulses

Marks, D. L. & Boppart, S. A., Dec 10 2007, New Approaches in Biomedical Spectroscopy. Kneipp, K., Kneipp, H., Aroca, R. & Wentrup-Byrne, E. (eds.). p. 236-258 23 p. (ACS Symposium Series; vol. 963).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nonlinear interferometric vibrational imaging of biological tissue

Jiang, Z., Marks, D. L., Geddes, J. B. & Boppart, S. A., Apr 21 2008, Multiphoton Microscopy in the Biomedical Sciences VIII. 68600Y. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6860).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Non-paraxial solution to inverse scattering in optical coherence tomography

Ralston, T. S., Marks, D. L., Boppart, S. A. & Scott Carney, P., 2006, Frontiers in Optics, FiO 2006. Optical Society of America

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nonsubsampled contourlet transform: Filter design and applications in denoising

Da Cunha, A. L., Zhou, J. & Do, M. N., Dec 1 2005, IEEE International Conference on Image Processing 2005, ICIP 2005. p. 749-752 4 p. 1529859. (Proceedings - International Conference on Image Processing, ICIP; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nonsubsampled contourlet transform: Construction and application in enhancement

Zhou, J., Cunha, A. L. & Do, M. N., Dec 1 2005, IEEE International Conference on Image Processing 2005, ICIP 2005. p. 469-472 4 p. 1529789. (Proceedings - International Conference on Image Processing, ICIP; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Novel aluminum-carbon materials

Jasiuk, I., Nilufar, S., Salamanca-Riba, L., Isaacs, R. & Siddiqi, S., 2013, Technical Proceedings of the 2013 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2013. Vol. 1. p. 27-30 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Novel applications of plasmonic bowtie nanoantennas in the presence of enhanced local heating

Toussaint, K. C., Jul 21 2014, Frontiers in Optics, FiO 2016. OSA - The Optical Society, (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Novel metal-matrix composites with integrally-bound nanoscale carbon

Forrest, D. R., Jasiuk, I., Brown, L., Joyce, P., Mansour, A. & Salamanca-Riba, L., Aug 20 2012, Technical Proceedings of the 2012 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2012. p. 560-563 4 p. (Technical Proceedings of the 2012 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nuclear dynamics in metastatic cells studied by quantitative phase imaging

Ceballos, S., Kandel, M., Sridharan, S., Monroy, F. & Popescu, G., Jan 1 2015, Quantitative Phase Imaging. Park, Y. & Popescu, G. (eds.). SPIE, 93361Q. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9336).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nucleation kinetics determination in high-throughput microfluidic systems

Goh, L. M., Chen, K. J., He, G. H., Bhamidi, V., Kenis, P. J. A., Zukoski, C. F. & Braatz, R. D., Dec 1 2007, 2007 AIChE Annual Meeting. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Numerical simulation of air flows in a full-scale ventilated room using different turbulence models

Jiang, J. B., Wang, X. & Zhang, Y., Dec 1 2005, Livestock Environment VII - Proceedings of the Seventh International Symposium. Briggs, M. J. & McCormick, M. E. (eds.). p. 35-44 10 p. (Livestock Environment VII - Proceedings of the Seventh International Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

O(N2 log N) native fan-beam tomographic reconstruction

Xiao, S., Bresler, Y. & Munson, D. C., Jan 1 2002, 2002 IEEE International Symposium on Biomedical Imaging, ISBI 2002 - Proceedings. IEEE Computer Society, p. 824-827 4 p. 1029386. (Proceedings - International Symposium on Biomedical Imaging; vol. 2002-January).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Oblique pursuits for compressed sensing with random anisotropic measurements

Lee, K., Bresler, Y. & Junge, M., Dec 19 2013, 2013 IEEE International Symposium on Information Theory, ISIT 2013. p. 849-853 5 p. 6620346. (IEEE International Symposium on Information Theory - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observation of the photoscattering effect from supercontinuum-generating germanosilicate fiber

Tu, H., Marks, D. L. & Boppart, S. A., Jun 13 2008, Nonlinear Frequency Generation and Conversion: Materials, Devices, and Applications VII. 68750Z. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6875).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observations of perseverative coarticulation in lateral approximants using MRI

Wong, N., Fu, M., Liang, Z. P., Shosted, R. K. & Sutton, B. P., 2013, Contributions to the 14th Annual Conference on Speech Communication (Interspeech), Lyon, France. p. 612-616 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observations on the response of actin networks in living fibroblasts due to large indentation/compression disturbance

Yang, S. & Saif, M. T. A., Dec 1 2005, Proceedings of the 2005 Summer Bioengineering Conference, 2005 SBC. p. 303-304 2 p. (Proceedings of the 2005 Summer Bioengineering Conference; vol. 2005).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observer efficiency in boundary discrimination tasks related to assessment of breast lesions with ultrasound

Abbey, C. K., Zemp, R. J., Liu, J., Lindfors, K. K. & Insana, M., Jun 22 2006, Medical Imaging 2006: Image Perception, Observer Performance, and Technology Assessment. 61460O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6146).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observing hydrogen induced deformations in palladium thin-films

Edwards, C., McKeown, S. J., Zhou, J., Popescu, G. & Goddard, L. L., Dec 1 2013, 2013 IEEE Photonics Conference, IPC 2013. p. 612-613 2 p. 6656443. (2013 IEEE Photonics Conference, IPC 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observing the continuous transformation of a four level laser into a two level system

Hewitt, J. D., Galvin, T. C., Readle, J. D. & Eden, J. G., Dec 1 2011, IEEE Photonic Society 24th Annual Meeting, PHO 2011. p. 837-838 2 p. 6110818. (IEEE Photonic Society 24th Annual Meeting, PHO 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observing the continuous transformation of a four level laser into a two level system

Hewitt, J. D., Readle, J. D. & Eden, J. G., 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5950247

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Of chicken teeth and mouse eyes, or generalized character compatibility

Benham, C., Kannan, S. & Warnow, T., Jan 1 1995, Combinatorial Pattern Matching - 6th Annual Symposium, CPM 1995, Proceedings. Galil, Z. & Ukkonen, E. (eds.). Springer-Verlag Berlin Heidelberg, p. 17-26 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 937).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On clustering fMRI using potts and mixture regression models

Xia, J., Liang, F. & Wang, Y. M., Jan 1 2009, Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009. IEEE Computer Society, p. 4795-4798 4 p. 5332641. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Online sparsifying transform learning for signal processing

Ravishankar, S., Weni, B. & Bresler, Y., Feb 5 2014, 2014 IEEE Global Conference on Signal and Information Processing, GlobalSIP 2014. Institute of Electrical and Electronics Engineers Inc., p. 364-368 5 p. 7032140. (2014 IEEE Global Conference on Signal and Information Processing, GlobalSIP 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On model-based MR spectroscopic imaging

Jacob, M., Sutton, B., Haldar, J. & Liang, Z-P., Nov 17 2006, 2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 726-729 4 p. 162519. (2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On MR experiment design with quadratic regularization

Haldar, J. P. & Liang, Z-P., Nov 2 2011, 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11. p. 1676-1679 4 p. 5872726. (Proceedings - International Symposium on Biomedical Imaging).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On the bandlimitedness of the plenoptic function

Do, M. N., Marchand-Maillet, D. & Vetterli, M., Dec 1 2005, IEEE International Conference on Image Processing 2005, ICIP 2005. p. 17-20 4 p. 1530317. (Proceedings - International Conference on Image Processing, ICIP; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On the homogenization of data from two laboratories using Genetic Programming

Moreno-Torres, J. G., Llorà, X., Goldberg, D. E. & Bhargava, R., Dec 1 2010, Learning Classifier Systems - 11th International Workshop, IWLCS 2008 and 12th International Workshop, IWLCS 2009, Revised Selected Papers. p. 185-197 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6471 LNAI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On the information rate of the plenoptic function

Da Cunha, A. L., Do, M. N. & Vetterli, M., Dec 1 2006, 2006 IEEE International Conference on Image Processing, ICIP 2006 - Proceedings. p. 2489-2492 4 p. 4107073. (Proceedings - International Conference on Image Processing, ICIP).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On the necessary density for spectrum-blind nonuniform sampling subject to quantization

Gastpar, M. & Bresler, Y., Jan 1 2000, Signal Processing Theory and Methods I. Institute of Electrical and Electronics Engineers Inc., p. 348-351 4 p. 861970. (ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On the resolution capacity of wideband sensor arrays

Bresler, Y. & Ficker, A. J., 1989, Sixth Multidimens Signal Process Workshop. Anon (ed.). Publ by IEEE, p. 128-129 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On the resolution capacity of wideband sensor arrays: Further results

Bresler, Y., 1991, Proceedings - ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing. Anon (ed.). Publ by IEEE, Vol. 2. p. 1353-1356 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical characteristics of bio-inspired lasers based on fluorescent biomaterials and bioconjugates

Rivera, J. A. & Eden, J. G., Jul 21 2014, Frontiers in Optics, FiO 2016. OSA - The Optical Society

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical characterization of contrast agents for optical coherence tomography

Lee, T. M., Toublan, F. J. J., Oldenburg, A., Sitafalwalla, S., Luo, W., Marks, D. L., Suslick, K. S. & Boppart, S. A., 2003, Proc. SPIE: Genetically Engineered and Optical Probes for Biomedical Applications. SPIE, Vol. 4967. p. 129-134 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical characterization of nanopillar black silicon for plasmonic and solar cell application

Gartia, M. R., Chen, Y., Xu, Z., Bordain, Y. C., Eichorst, J., Mabon, J. C., De Soares, J. A. N. T., Clegg, R. M. & Liu, G. L., Oct 19 2011, Plasmonics: Metallic Nanostructures and Their Optical Properties IX. 80962B. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8096).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical coherence microscopy using hardware and computational adaptive optics

Liu, Y. Z., South, F. A., Pande, P., Shemonski, N. D., Carney, P. S. & Boppart, S. A., Jan 1 2015, Adaptive Optics: Analysis, Methods and Systems, AO 2015. Optical Society of America (OSA), 1 p. (Adaptive Optics: Analysis, Methods and Systems, AO 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical coherence tomography for the diagnosis of human otitis media

Cho, N. H., Jung, U., Jang, J. H., Jung, W., Kim, J., Lee, S. H. & Boppart, S. A., Sep 17 2013, Nano-Bio Sensing, Imaging, and Spectroscopy. 88790N. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8879).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical coherence tomography of cell dynamics in three-dimensional engineered tissues

Boppart, S. A., Tan, W., Ko, H. J. & Vinegoni, C., Jan 1 2005, European Conference on Biomedical Optics, ECBO 2005. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical coherence tomography of cell dynamics in three-dimensional engineered tissues

Boppart, S. A., Tan, W., Ko, H. J. & Vinegoni, C., Jan 1 2005, European Conference on Biomedical Optics, ECBO 2005. Optical Society of America, (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution