Research Output

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Conference contribution
2008

DNA-based animal models of human disease: From genotype to phenotype

Schook, L. B., Kuzmuk, K., Adam, S., Rund, L., Chen, K., Rogatcheva, M., Mazur, M., Pollock, C. & Counter, C., Sep 1 2008, Animal Genomics for Animal Health. Pinard, M-H., Gay, C. & Pastoret, P-P. (eds.). p. 15-25 11 p. (Developments in Biologicals; vol. 132).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Engineering a fungal L-Arabinose pathway towards the utilization of pentose sugars for production of xylitol and ethanol

Sullivan, R. P., Nair, N. U. & Zhao, H., 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Enhanced fluorescence via photonic crystal slabs incorporating nanorod structures

Zhang, W., Ganesh, N., Mathias, P. C. & Cunningham, B. T., Sep 15 2008, 2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS. 4551601. (2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Enhanced fluorescence via photonic crystal slabs incorporating nanorod structures

Zhang, W., Ganesh, N., Mathias, P. C. & Cunningham, B. T., 2008, Conference on Lasers and Electro-Optics, CLEO 2008. Optical Society of America

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Exact reconstruction formula for diffuse optical tomography using simultaneous sparse representation

Jong, C. Y., Su, Y. L. & Bresler, Y., Sep 10 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 1621-1624 4 p. 4541323. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fast acquisition and reconstruction in imaging enabled by sampling theory

Bresler, Y., Jun 17 2008, Proceedings of SPIE-IS and T Electronic Imaging - Computational Imaging VI. 681402. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6814).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fluorescence Amplification using Photonic Crystal Slabs

Ganesh, N., Mathias, P. C., Zhang, W. & Cunningham, B. T., Dec 1 2008, 2008 IEEE Sensors, SENSORS 2008. p. 1183-1186 4 p. 4716653. (Proceedings of IEEE Sensors).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Further development in anatomically constrained MR image reconstruction: Application to multimodal imaging of mouse stroke

Haldar, J. P., Wu, T. H., Wang, Q., Chen, C. I., Song, S. K. & Liang, Z. P., Dec 1 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. p. 422-425 4 p. 4649180. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Heart of the matter: Discovering the consensus of multiple clustering results

Kosorukoff, A. & Sinha, S., Dec 1 2008, Proceedings - IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2008. p. 155-162 8 p. 4684887. (Proceedings - IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

High resolution reduced-FOV diffusion tensor imaging of the human pons with multi-shot variable density spiral at 3T

Karampinos, D. C., Van, A. T., Olivero, W. C., Georgiadis, J. G. & Sutton, B. P., Dec 1 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. p. 5761-5764 4 p. 4650523. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Inhomogeneity and size of Microstructure - A new paradigm in understanding deformation mechanism of nanocrystalline metals

Rajagopalan, J., Han, J. & Saif, M. T. A., Sep 18 2008, Plasticity, Failure and Fatigue in Structural Materials-from Macro to Nano: Proceedings of the Hael Mughrabi Honorary Symposium - Held during TMS 2008 Annual Meeting and Exhibition. p. 201-206 6 p. (TMS Annual Meeting).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Interferometric synthetic aperture microscopy

Boppart, A., Ralston, T. S., Marks, D. L. & Carney, P. S., Aug 19 2008, OFC/NFOEC 2008 - 2008 Conference on Optical Fiber Communication/National Fiber Optic Engineers Conference. 4528548. (OFC/NFOEC 2008 - 2008 Conference on Optical Fiber Communication/National Fiber Optic Engineers Conference).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Interferometric Synthetic Aperture Microscopy: Tissue structure inferred by computed imaging techniques

Marks, D. L., Ralston, T. S., Davis, B. J., Carney, P. S. & Boppart, S. A., Apr 21 2008, Biomedical Applications of Light Scattering II. 686407. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6864).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

In vitro stem cell analog development: Image cytometry analysis of hematopoietic stem and progenitor cells in the Bone Marrow

Harley, B. A., Levantini, E., Mahoney, J. E., Arrieta, C. N., Tenen, D. G., Protopopov, A. & Silberstein, L. E., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Iterative learning control for robotic deposition using machine vision

Hoelzle, D. J., Alleyne, A. G. & Wagoner Johnson, A. J., Sep 30 2008, 2008 American Control Conference, ACC. p. 4541-4547 7 p. 4587211. (Proceedings of the American Control Conference).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Joint encoding of the depth image based representation using shape-adaptive wavelets

Maitre, M. & Do, M. N., Dec 1 2008, 2008 IEEE International Conference on Image Processing, ICIP 2008 Proceedings. p. 1768-1771 4 p. 4712118. (Proceedings - International Conference on Image Processing, ICIP).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Joint reconstruction of noisy high-resolution MR image sequences

Haldar, J. P. & Liang, Z. P., Sep 10 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 752-755 4 p. 4541105. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

K-space and image space combination for motion artifact correction in multicoil multishot diffusion weighted imaging

Van Anh, T., Karampinos, D. C., Georgiadis, J. G. & Sutton, B. P., Dec 1 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. p. 1675-1678 4 p. 4649497. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Label free detection of PCR amplification

Liu, Y. S., Banada, P. P., Bhunia, A. K. & Bashir, R., Dec 1 2008, 2008 IEEE Sensors, SENSORS 2008. p. 550-553 4 p. 4716498. (Proceedings of IEEE Sensors).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetic protein microspheres as dynamic contrast agents for magnetomotive optical coherence tomography

Nguyen, F. T., Dibbern, E. M., Chaney, E. J., Oldenburg, A. L., Suslick, K. S. & Boppart, S. A., Apr 21 2008, Molecular Probes for Biomedical Applications II. 68670F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6867).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Measurement of particle size distributions in swine buildings

Lee, J., Zhang, Y., Wang, X., Yang, X., Su, J., Faulkner, B., Shaw, B. W. & Riskowski, G. L., Dec 1 2008, Livestock Environment VIII - Proceedings of the 8th International Symposium. p. 95-100 6 p. (Livestock Environment VIII - Proceedings of the 8th International Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Measurements of charge transport processes occurring at alkane thiol modified gold electrodes in contact with aqueous electrolytes

Gupta, C., Shannon, M. A. & Kenis, P. J. A., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mechanical properties of chromium carbide based cermets at micro-level

Hussainova, I., Jasiuk, I., Du, X., Cabassa, D. & Pirso, J., Dec 1 2008, Advances in Powder Metallurgy and Particulate Materials - 2008, Proceedings of the 2008 World Congress on Powder Metallurgy and Particulate Materials, PowderMet 2008. p. 10180-10191 12 p. (Advances in Powder Metallurgy and Particulate Materials - 2008, Proceedings of the 2008 World Congress on Powder Metallurgy and Particulate Materials, PowderMet 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

MEMS based sensors to explore the role of tension in axons for neuro-transmission

Yang, S., Siechen, S., Sung, J., Chiba, A. & Saif, M. T. A., Aug 29 2008, MEMS 2008 Tucson - 21st IEEE International Conference on Micro Electro Mechanical Systems. p. 308-310 3 p. 4443654. (Proceedings of the IEEE International Conference on Micro Electro Mechanical Systems (MEMS)).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microfluidic platforms for (Membrane) protein crystallization

Kenis, P. J. A., Perry, S. L., Roberts, G. W., Talreja, S., Tice, J. D., Zukoski, C. F. & Gennis, R. B., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Modeling and measurement of tissue elastic moduli using optical coherence elastography

Liang, X., Oldenburg, A. L., Crecea, V., Kalyanam, S., Insana, M. F. & Boppart, S. A., Jun 26 2008, Optics in Tissue Engineering and Regenerative Medicine II. 685803. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6858).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Molecular dynamics study on thermodynamical properties of bulk silicon under strain

Zhao, H. & Aluru, N. R., Oct 1 2008, Technical Proceedings of the 2008 NSTI Nanotechnology Conference and Trade Show, NSTI-Nanotech, Nanotechnology 2008. p. 651-654 4 p. (Technical Proceedings of the 2008 NSTI Nanotechnology Conference and Trade Show, NSTI-Nanotech, Nanotechnology 2008; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanoporous separator to minimize fuel crossover in a direct methanol laminar flow fuel cell

Hollinger, A. S., Markoski, L. J. & Kenis, P. J. A., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

New insights into cadherin biology using cadherin tethered PEG-surfaces and micropatterning

Hakanson, M., Ochsner, M., Anderegg, F., Smith, M., Grandin, M., Leckband, D., Vogel, V. & Textor, M., Dec 1 2008, 8th World Biomaterials Congress 2008. 1 p. (8th World Biomaterials Congress 2008; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nonlinear interferometric vibrational imaging of biological tissue

Jiang, Z., Marks, D. L., Geddes, J. B. & Boppart, S. A., Apr 21 2008, Multiphoton Microscopy in the Biomedical Sciences VIII. 68600Y. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6860).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observation of the photoscattering effect from supercontinuum-generating germanosilicate fiber

Tu, H., Marks, D. L. & Boppart, S. A., Jun 13 2008, Nonlinear Frequency Generation and Conversion: Materials, Devices, and Applications VII. 68750Z. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6875).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystal biosensors and tunable resonant optical devices

Cunningham, B. T., 2008, 2008 IEEE/LEOS International Conference on Optical MEMS and Nanophotonics, OPT MEMS. p. 50-51 2 p. 4607823

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystal optical limiting filter

Yang, F., Yen, G. & Cunningham, B. T., Jan 1 2008, Conference on Lasers and Electro-Optics, CLEO 2008. Optical Society of America, (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystal optical limiting filter

Yang, F., Yen, G. & Cunningham, B. T., 2008, 2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS. 4551862

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystal optofluidics for high throughput biosensing

Choi, C. J. & Cunningham, B. T., Sep 15 2008, 2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS. 4551017. (2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystal optofluidics for high throughput biosensing

Choi, C. J. & Cunningham, B. T., 2008, Conference on Lasers and Electro-Optics, CLEO 2008. Optical Society of America

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystals: A platform for label-free and enhanced fluorescence biomolecular and cellular assays

Cunningham, B. T., Chan, L., Mathias, P. C., Ganesh, N., George, S., Lidstone, E., Heeres, J. & Hergenrother, P. J., Dec 1 2008, Materials for Optical Sensors in Biomedical Applications. p. 43-52 10 p. (Materials Research Society Symposium Proceedings; vol. 1133).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystals utilized for label-free and amplified fluorescence biodetection

Cunningham, B. T., Jun 2 2008, Micro (MEMS) and Nanotechnologies for Space, Defense, and Security II. 695910. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6959).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Plasmon-resonant gold nanorods provide spectroscopic OCT contrast in excised human breast tumors

Oldenburg, A. L., Hansen, M. N., Wei, A. & Boppart, S. A., Apr 21 2008, Molecular Probes for Biomedical Applications II. 68670E. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6867).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Plastic distributed feedback laser biosensor

Lu, M., Choi, S. S. & Cunningham, B. T., Dec 1 2008, 21st Annual Meeting of the IEEE Lasers and Electro-Optics Society, LEOS 2008. p. 169-170 2 p. 4688542. (Conference Proceedings - Lasers and Electro-Optics Society Annual Meeting-LEOS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Practical protocols for fast histopathology by Fourier transform infrared spectroscopic imaging

Keith, F. N., Reddy, R. K. & Bhargava, R., Apr 21 2008, Biomedical Optical Spectroscopy. 685306. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6853).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Quantifying the contractile behavior of individual fibroblasts within three-dimensional collagen scaffolds: A cellular solids approach

Harley, B. A. & Gibson, L. J., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Real-time cardiac MRI without triggering, gating, or breath holding

Brinegar, C., Wu, Y. J. L., Foley, L. M., Hitchens, T. K., Ye, Q., Ho, C. & Liang, Z. P., Dec 1 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. p. 3381-3384 4 p. 4649931. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Robust multichannel sampling

Nguyen, H. T. & Do, M. N., Dec 1 2008, 2008 IEEE International Conference on Image Processing, ICIP 2008 Proceedings. p. 653-656 4 p. 4711839. (Proceedings - International Conference on Image Processing, ICIP).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Role of micro-structural heterogeneity in determining mechanical properties of nano-scale metals

Saif, M. T. A., 2008, Advances in Heterogeneous Material Mechanics 2008 - 2nd International Conference on Heterogeneous Material Mechanics, ICHMM 2008. p. 9 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sequential delivery of dexamethasone and vegf to control local tissue response for carbon nanotube fluorescence based micro-capillary implantable sensors

Sung, J., Barone, P. W., Kong, H. J. & Strano, M. S., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spatial distribution measurement and simulation of particulate matter concentration in a tunnel ventilated swine building

Jerez, S. B., Zhang, Y. & Wang, X., Dec 1 2008, Livestock Environment VIII - Proceedings of the 8th International Symposium. p. 85-94 10 p. (Livestock Environment VIII - Proceedings of the 8th International Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spectral-domain magnetomotive OCT imaging of magnetic nanoparticle biodistribution

Oldenburg, A. L., Crecea, V., Rinne, S. A., Rezaeipoor, R., Chaney, E. J. & Boppart, S. A., Apr 21 2008, Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XII. 684719. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6847).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spectrum-blind sampling and compressive sensing for continuous-index signals

Bresler, Y., Oct 6 2008, 2008 Information Theory and Applications Workshop - Conference Proceedings, ITA. p. 547-554 8 p. 4601017. (2008 Information Theory and Applications Workshop - Conference Proceedings, ITA).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Structural and biochemical characterization of engineered tissue using FTIR spectroscopic imaging: Melanoma progression as an example

Bhargava, R. & Kong, R., Apr 21 2008, Design and Performance Validation of Phantoms Used in Conjunction with Optical Measurements of Tissue. 687004. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6870).

Research output: Chapter in Book/Report/Conference proceedingConference contribution