Research Output

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Conference contribution
2011

Optically tunable ring external-cavity laser

Zheng, J., Ge, C., Wagner, C. J., Meng, L., Cunningham, B. T. & Eden, J. G., Dec 1 2011, IEEE Photonic Society 24th Annual Meeting, PHO 2011. p. 644-645 2 p. 6110713. (IEEE Photonic Society 24th Annual Meeting, PHO 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical trapping efficiencies from n-phase cylindrical vector beams

Roxworthy, B. J. & Toussaint, K. C., Mar 28 2011, Complex Light and Optical Forces V. 79500X. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7950).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optimal strain design of saccharomyces cerevisiae for bioethanol production

Quarterman, J. C., Jin, Y-S., Price, N. D. & Kim, P. J., Dec 1 2011, 11AIChE - 2011 AIChE Annual Meeting, Conference Proceedings. (11AIChE - 2011 AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optimization of photonic crystal enhanced fluorescence by excitation laser angle scanning

Chaudhery, V., Lu, M., Pokhriyal, A., Schulz, S. C. & Cunningham, B. T., Dec 1 2011, 2011 11th IEEE International Conference on Nanotechnology, NANO 2011. p. 282-285 4 p. 6144349. (Proceedings of the IEEE Conference on Nanotechnology).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optofluidic microchip with VCSELs and edge emitting laser sources

Kasten, A. M., Tice, J. D., Eichorst, J. P., Dorvel, B. R., Kenis, P. J. A. & Choquette, K. D., Apr 11 2011, 2011 IEEE Winter Topicals, WTM 2011. p. 75-76 2 p. 5730054. (2011 IEEE Winter Topicals, WTM 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Patterning biomaterials to engineer cell fate

Harley, B. A., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, 1 p. (Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystal enhanced fluorescence using a quartz substrate to reduce limits of detection

Pokhriyal, A., Lu, M., Chaudhery, V., Huang, C. S., Schulz, S. & Cunningham, B. T., Sep 1 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5950506. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystal enhanced fluorescence using a quartz substrate to reduce limits of detection

Pokhriyal, A., Lu, M., Chaudhery, V., Huang, C. S., Schulz, S. & Cunningham, B. T., 2011, CLEO: Science and Innovations, CLEO_SI 2011.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystal enhanced microscopy: Multimode imaging for photonic crystal biosensors

Chaudhery, V., Lidstone, E. A., George, S., Huang, C. S., Kohl, A., Mathias, P. C. & Cunningham, B. T., Dec 1 2011, Bio-Optics: Design and Application, BODA 2011. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Plasmonic coupling of SiO2-Ag post-cap nanostructures and silver film for surface-enhanced Raman scattering

Wu, H. Y. & Cunningham, B. T., Sep 1 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5950146. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Plasmonic coupling of SiO2-Ag "post-cap" nanostructures and silver film for surface-enhanced Raman scattering

Wu, H. Y. & Cunningham, B. T., 2011, CLEO: Science and Innovations, CLEO_SI 2011.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Plastic-based distributed feedback laser biosensors in microplate format

Tan, Y., Ge, C., Chu, A., Lu, M. & Cunningham, B. T., Dec 1 2011, IEEE Photonic Society 24th Annual Meeting, PHO 2011. p. 423-424 2 p. 6110607. (IEEE Photonic Society 24th Annual Meeting, PHO 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Polymorph and crystal habit screening on a microfluidic platform

Thorson, M. R., Goyal, S., Zhang, G. G. Z., Gong, Y., Zukoski, C. F. & Kenis, P. J. A., Jan 1 2011, Separations Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, p. 1033-1034 2 p. (Separations Division - Core Programming Topic at the 2011 AIChE Annual Meeting; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

PSAR: Measuring multiple sequence alignment reliability by probabilistic sampling (Extended abstract)

Kim, J. & Ma, J., Apr 4 2011, Research in Computational Molecular Biology - 15th Annual International Conference, RECOMB 2011, Proceedings. p. 134-135 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6577 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Quantitative analysis of diseased horse tendons using Fourier-transform- second-harmonic generation imaging

Sivaguru, M., Durgam, S., Ambekar, R., Luedtke, D., Fried, G., Stewart, A. & Toussaint, K. C., May 5 2011, Multiphoton Microscopy in the Biomedical Sciences XI. 79030J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7903).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Quantitative ultrasound assessment of treated MAT tumors

Kemmerer, J., Ghoshal, G. & Oelze, M., Dec 1 2011, 2011 IEEE International Ultrasonics Symposium, IUS 2011. p. 1383-1386 4 p. 6293214. (IEEE International Ultrasonics Symposium, IUS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Random and deterministic transport in live cells quantified by SLIM

Popescu, G., 2011, Novel Techniques in Microscopy, NTM 2011. Optical Society of American (OSA)

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Reference-driven MR image reconstruction with sparsity and support constraints

Peng, X., Du, H. Q., Lam, F., Babacan, S. D. & Liang, Z. P., Nov 2 2011, 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11. p. 89-92 4 p. 5872361. (Proceedings - International Symposium on Biomedical Imaging).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Reference-guided sparsifying transform design for compressive sensing MRI

Babacan, S. D., Peng, X., Wang, X. P., Do, M. N. & Liang, Z-P., Dec 26 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 5718-5721 4 p. 6091384. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Regularized image reconstruction for PS model-based cardiovascular MRI

Christodoulou, A. G., Zhao, B. & Liang, Z. P., Nov 2 2011, 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11. p. 57-60 4 p. 5872353. (Proceedings - International Symposium on Biomedical Imaging).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rigorous quantification of polarized fiber continuum generation for broadband coherent optical sources

Tu, H., Liu, Y., Sharma, U. & Boppart, S. A., Dec 1 2011, CLEO: Science and Innovations, CLEO_SI 2011. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rigorous quantification of polarized fiber continuum generation for broadband coherent optical sources

Tu, H., Liu, Y., Sharma, U. & Boppart, S. A., Sep 1 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5950956. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rigorous quantification of polarized fiber continuum generation for broadband coherent optical sources

Tu, H., Liu, Y., Sharma, U. & Boppart, S. A., Dec 1 2011, Quantum Electronics and Laser Science Conference, QELS 2011. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rigorous quantification of polarized fiber continuum generation for broadband coherent optical sources

Tu, H., Liu, Y., Sharma, U. & Boppart, S. A., Dec 1 2011, CLEO: Applications and Technology, CLEO_AT 2011. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rigorous quantification of polarized fiber continuum generation for broadband coherent optical sources

Tu, H., Liu, Y., Sharma, U. & Boppart, S. A., Jan 1 2011, CLEO: Applications and Technology, CLEO_AT 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

SERS nanodomes for in-line detection within biomedical tubing

Choi, C., Wu, H. Y. & Cunningham, B. T., Dec 1 2011, Frontiers in Optics, FiO 2011. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

SERS nanodomes for in-line detection within biomedical tubing

Choi, C., Wu, H. Y. & Cunningham, B. T., 2011, Frontiers in Optics, FiO 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Simulation and experimental analysis of a portable powered ankle-foot orthosis control

Li, Y., Shorter, K. A., Hsiao-Wecksler, E. T. & Bretl, T., Dec 1 2011, ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011. p. 77-84 8 p. (ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spatial light interference microscopy (SLIM)

Popescu, G., Dec 1 2011, IEEE Photonic Society 24th Annual Meeting, PHO 2011. 1 p. 6110797. (IEEE Photonic Society 24th Annual Meeting, PHO 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spatiotemporal denoising of MR spectroscopic imaging data by low-rank approximations

Nguyen, H. M., Peng, X., Do, M. N. & Liang, Z-P., Nov 2 2011, 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11. p. 857-860 4 p. 5872539. (Proceedings - International Symposium on Biomedical Imaging).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Statistics of photon transport in hundreds of coupled resonators

Cooper, M. L., Gupta, G., Schneider, M. A., Shen, Y., Green, W. M. J., Assefa, S., Xia, F., Vlasov, Y. A. & Mookherjea, S., 2011, CLEO: Science and Innovations, CLEO_SI 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Testing of electrode durability for extended operation within an alkaline fuel cell

Naughton, M. S. & Kenis, P. J. A., 2011, 11AIChE - 2011 AIChE Spring Meeting and 7th Global Congress on Process Safety, Conference Proceedings. American Institute of Chemical Engineers

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The effect of growth factor supplementation on tendon cell migration, viability, and gene expression in anisotropic collagen-glycosaminoglycan scaffolds

Caliari, S. R., Beyer, L. S. & Harley, B. A., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, 1 p. (Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The impact of aberrations on object reconstruction with interferometric synthetic aperture microscopy

Adie, S. G., Graf, B. W., Ahmad, A., Darbarsyah, B., Boppart, S. A. & Carney, P. S., Apr 12 2011, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XV. 78891O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7889).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The impact of different estimator algorithms when obtaining effective diameter estimates from populations of scatterers of different sizes

Lavarello, R. J. & Oelze, M. L., Dec 1 2011, 2011 IEEE International Ultrasonics Symposium, IUS 2011. p. 45-48 4 p. 6293049. (IEEE International Ultrasonics Symposium, IUS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The mechanical sensitivity of vesicle dynamics in in vivo and in vitro neurons

Ahmed, W. W., Li, T. C., Rubakhin, S., Chiba, A., Sweedler, J. V. & Saif, M. T. A., Nov 23 2011, Technical Proceedings of the 2011 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2011. p. 436-439 4 p. (Technical Proceedings of the 2011 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2011; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Three-dimensional quantitative high-frequency characterization of freshly-excised human lymph nodes

Mamou, J., Saegusa-Beecroft, E., Coron, A., Oelze, M. L., Yamaguchi, T., Machi, J., Hata, M., Yanagihara, E., Laugier, P. & Feleppa, E. J., Dec 1 2011, 2011 IEEE International Ultrasonics Symposium, IUS 2011. p. 37-40 4 p. 6293397. (IEEE International Ultrasonics Symposium, IUS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tiny hydraulics for powered orthotics

Durfee, W., Xia, J. & Hsiao-Wecksler, E., Jan 1 2011, 2011 IEEE International Conference on Rehabilitation Robotics, ICORR 2011 - Rehab Week Zurich 2011. IEEE Computer Society, 5975473. (IEEE International Conference on Rehabilitation Robotics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tomographic reconstruction by quantitative phase imaging with broadband fields

Wang, Z., Marks, D., Carney, S., Mir, M. & Popescu, G., Jan 1 2011, Novel Techniques in Microscopy, NTM 2011. Optical Society of American (OSA), (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tomographic reconstruction by quantitative phase imaging with broadband fields

Wang, Z., Marks, D., Carney, P. S., Mir, M. & Popescu, G., 2011, Novel Techniques in Microscopy, NTM 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tuning the binding kinetics of angiogenic factors for revascularization therapies

Schmidt, J. J. & Kong, H., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, 1 p. (Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tuning the dependency between stiffness and permeability of cell-encapsulating hydrogel with hydrophilic pendant chains

Cha, C., Jeong, J. H. & Kong, H., Dec 1 2011, 11AIChE - 2011 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tuning the dependency between stiffness and permeability of cell-encapsulating hydrogel with hydrophilic pendant chains

Cha, C., Jeong, J. H. & Kong, H., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, p. 880-885 6 p. (Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ultrasound therapy applicators for controlled thermal modification of tissue

Burdette, E. C., Lichtenstiger, C., Rund, L., Keralapura, M., Gossett, C., Stahlhut, R., Neubauer, P., Komadina, B., Williams, E., Alix, C., Jensen, T., Schook, L. B. & Diederich, C. J., Apr 14 2011, Energy-Based Treatment of Tissue and Assessment VI. 79010W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7901).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using microfluidics and mass spectrometry to study peptide release in neurons

Croushore, C. A., Lee, C. Y., Zhong, M. & Sweedler, J. V., Dec 1 2011, 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2011, MicroTAS 2011. p. 858-860 3 p. (15th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2011, MicroTAS 2011; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using photonic crystal enhanced fluorescence on quartz substrates to improve the sensitivity of DNA microarrays

George, S., Pokhriyal, A., Jones, S. I., Lu, M., Vodkin, L. O. & Cunningham, B. T., Dec 26 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 26-29 4 p. 6089888. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2010

3D Shear wave imaging: A simulation and experimental study

Orescanin, M., Wang, Y. & Insana, M., Dec 1 2010, 2010 IEEE International Ultrasonics Symposium, IUS 2010. p. 1035-1038 4 p. 5935669. (Proceedings - IEEE Ultrasonics Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Accelerating iterative field-compensated MR image reconstruction on GPUs

Zhuo, Y., Wu, X. L., Haldar, J. P., Hwu, W. M., Liang, Z. P. & Sutton, B. P., Aug 9 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings. p. 820-823 4 p. 5490112. (2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Adaptive angular sampling approach for emission tomography

Li, N. & Meng, L. J., Dec 1 2010, IEEE Nuclear Science Symposuim and Medical Imaging Conference, NSS/MIC 2010. p. 2903-2909 7 p. 5874327. (IEEE Nuclear Science Symposium Conference Record).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A new approach for detecting attenuation changes during high-intensityfocused ultrasound

Kemmerer, J., Chang, S. & Oelze, M., Dec 1 2010, 2010 IEEE International Ultrasonics Symposium, IUS 2010. p. 1404-1407 4 p. 5935846. (Proceedings - IEEE Ultrasonics Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution