Research Output 1941 2018

Filter
Conference contribution
2018

Characterization of a reflective objective with multiphoton microscopy

Kabir, M. M., Choubal, A. M., Sivaguru, M. & Toussaint, K. C. Jan 1 2018 Multiphoton Microscopy in the Biomedical Sciences XVIII. SPIE, Vol. 10498, 104982Z

Research output: Chapter in Book/Report/Conference proceedingConference contribution

numerical aperture
Harmonic generation
Photons
Glass
Microscopy

Correlating cellular features with gene expression using CCA

Subramanian, V., Chidester, B., Ma, J. & Do, M. N. May 23 2018 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April, p. 805-808 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Gene expression
Genes
Gene Expression
Cell Nucleus Shape
Neoplasms

Mobile biosensing using the sensing capabilities of smartphone cameras

Cunningham, B. T., Long, K. D., Yu, H., Chen, W., Sun, F., Ornob, A., Ganguli, A., Lumetta, S. & Bashir, R. Jan 4 2018 2017 IEEE MTT-S International Microwave Workshop Series on Advanced Materials and Processes for RF and THz Applications, IMWS-AMP 2017. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-January, p. 1-3 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Slip forming
Smartphones
Image processing
Cameras
cameras

Photonic crystal resonant coupling to nanoantennas and applications for digital resolution biosensing

Cunningham, B. T., Liu, J. N., Huang, Q., Canady, T., Long, K. D., Li, N., Pastor, M. A., Kwon, L., Liu, K. K. & Singamaneni, S. Jan 1 2018 Microscopy Histopathology and Analytics, MICROSCOPY 2018. OSA - The Optical Society, Vol. Part F89-MICROSCOPY 2018

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystals
Biomarkers
Pathogens
Tumor Biomarkers
MicroRNAs

Structural OCT middle ear imaging correlated with functional wideband acoustic immittance measurements

Won, J., Monroy, G. L., Huang, P. C., Hill, M. C., Novak, M. A., Porter, R. G., Chaney, E., Barkalifa, R. & Boppart, S. A. Jan 1 2018 Clinical and Translational Biophotonics, TRANSLATIONAL 2018. OSA - The Optical Society, Vol. Part F91-TRANSLATIONAL 2018

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Acoustics
Imaging techniques
Pediatrics
Pathology

Toward interstitial Magnetic hyperthermia dosimetry via magnetomotive optical coherence elastography

Huang, P. C., Spillman, D. R., Odintsov, B., Sobh, N. A. & Boppart, S. A. Jan 1 2018 Optical Tomography and Spectroscopy, OTS 2018. OSA - The Optical Society, Vol. Part F90-OTS 2018

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Shear waves
Dosimetry
Seed
Stiffness
Heating
2017

Achieving uniformity and reproducibility for photonic crystal fluorescence enhanced disease diagnostic microarrays

Race, C. M., Kwon, L. & Cunningham, B. T. Jan 5 2017 IEEE Sensors, SENSORS 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7808961

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microarrays
Photonic crystals
Fluorescence
Assays
Allergies

Adaptive multiphoton imaging by high peak-power coherent fiber supercontinuum

Tu, H. & Boppart, S. A. Jan 1 2017 International Conference on Photonics and Imaging in Biology and Medicine, PIBM 2017. OSA - The Optical Society, Vol. Part F70-PIBM 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Imaging techniques
Fibers

An automated microfluidic assay for the detection of cancer biomarkers in serum using photonic crystal enhanced fluorescence

Kwon, L., Race, C., Foreman, M. & Cunningham, B. Jan 5 2017 IEEE Sensors, SENSORS 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7808960

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photonic crystals
Microfluidics
Assays
Fluorescence
Enzymes

A simple planar focusing collector for concentrated solar power applications

Ding, Q., Jacobs, K., Choubal, A., Mensing, G., Zhang, Z., Tirawat, R., Zhu, G., Wendelin, T., Jay Guo, L., Ferreira, P. & Toussaint, K. C. Jan 1 2017 Optics for Solar Energy, OSE 2017. OSA - The Optical Society, Vol. Part F69-OSE 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Solar energy
Lithography
Scalability
Optics
Photons

Automatic parameter tuning for image denoising with learned sparsifying transforms

Pfister, L. & Bresler, Y. Jun 16 2017 2017 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 6040-6044 5 p. 7953316

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image denoising
Tuning
Filter banks
Analytical models
Experiments

Blind gain and phase calibration for low-dimensional or sparse signal sensing via power iteration

Li, Y., Lee, K. & Bresler, Y. Sep 1 2017 2017 12th International Conference on Sampling Theory and Applications, SampTA 2017. Institute of Electrical and Electronics Engineers Inc., p. 119-123 5 p. 8024422

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Calibration
Sensing
Iteration
Unknown
Sparsity

CLEO®/Europe-EQEC 2017 thin-disk ti: Sapphire laser arrays for many-beam generation and power scaling

Steinforth, A. W., Rivera, J. A. & Eden, J. G. Jan 1 2017 The European Conference on Lasers and Electro-Optics, CLEO_Europe 2017. OSA - The Optical Society, Vol. Part F82-CLEO_Europe 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sapphire
Lasers

Concatenated image completion via tensor augmentation and completion

Bengua, J. A., Tuan, H. D., Phien, H. N. & Do, M. N. Feb 3 2017 2016, 10th International Conference on Signal Processing and Communication Systems, ICSPCS 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7843326

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tensors
Color
Recovery
Factorization

Contrast and quantitative ultrasound mapping of heterogeneous tumor function and structure

Griffon, J., Le Guillou-Buffello, D., Laifa, O., Doury, M., Dizeux, A., Lamuraglia, M., Oelze, M. & Bridal, S. L. Oct 31 2017 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092250

Research output: Chapter in Book/Report/Conference proceedingConference contribution

tumors
endothelium
mice
therapy
cancer

Contrast and quantitative ultrasound mapping of heterogeneous Tumor function and structure

Griffon, J., Le Guillou-Buffello, D., Laifa, O., Doury, M., Dizeux, A., Lamuraglia, M., Oelze, M. & Bridal, S. L. Oct 31 2017 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092670

Research output: Chapter in Book/Report/Conference proceedingConference contribution

tumors
histology
ultrasonics
evaluation

Crimp analysis of connective tissue using quantitative second-harmonic generation microscopy

Lee, W., Rahman, H., Kersh, M. E. & Toussaint, K. C. Jan 1 2017 Frontiers in Optics, FiO 2017. OSA - The Optical Society, Vol. Part F66-FiO 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ligaments
Harmonic generation
Microscopic examination
Tissue
Tendons

Depth-resolved characterization of the in vivo tympanic membrane using nano-sensitive optical coherence tomography

Dsouza, R., Won, J., Monroy, G. L., Porter, R. G., Novak, M. A., Hill, M. C. & Boppart, S. A. Jan 1 2017 CLEO: Science and Innovations, CLEO_SI 2017. OSA - The Optical Society, Vol. Part F41-CLEO_SI 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical tomography
Membranes

Depth-Resolved characterization of the in vivo tympanic membrane using nano-Sensitive optical coherence tomography

Dsouza, R., Won, J., Monroy, G. L., Porter, R. G., Novak, M. A., Hill, M. C. & Boppart, S. A. Oct 25 2017 2017 Conference on Lasers and Electro-Optics, CLEO 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2017-January, p. 1-2 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical tomography
tomography
middle ear
membranes
Membranes

Design and biomechanical evaluation methodology of pneumatic ergonomic crutch

Xiao, C., Jahanian, O., Schnorenberg, A., Slavens, B. & Hsiao-Wecksler, E. Jan 1 2017 Frontiers in Biomedical Devices, BIOMED - 2017 Design of Medical Devices Conference, DMD 2017. American Society of Mechanical Engineers

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ergonomics
Pneumatics

Design of a nanopatterned long focal-length planar focusing collector for concentrated solar power

Ding, Q., Choubal, A. & Toussaint, K. C. 2017 Photonic and Phononic Properties of Engineered Nanostructures VII. SPIE, Vol. 10112, 101120O

Research output: Chapter in Book/Report/Conference proceedingConference contribution

accumulators
Solar energy
troughs
Wavelength
Solar power plants

Design of a portable position, velocity, and resistance meter (PVRM) for convenient clinical evaluation of spasticity or rigidity

Song, S. Y., Pei, Y., Liang, J. & Hsiao-Wecksler, E. T. Jan 1 2017 Frontiers in Biomedical Devices, BIOMED - 2017 Design of Medical Devices Conference, DMD 2017. American Society of Mechanical Engineers

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rigidity

Directed assembly of microsphere-stabilized laser arrays

Rivera, J. A., Galvin, T. C. & Eden, J. G. Jan 23 2017 2016 IEEE Photonics Conference, IPC 2016. Institute of Electrical and Electronics Engineers Inc., p. 356-357 2 p. 7831135

Research output: Chapter in Book/Report/Conference proceedingConference contribution

laser arrays
Microspheres
assembly
Fabrication
fabrication

Direct photometric alignment by mesh deformation

Lin, K., Jiang, N., Liu, S., Cheong, L. F., Do, M. & Lu, J. Nov 6 2017 Proceedings - 30th IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2017. Institute of Electrical and Electronics Engineers Inc., Vol. 2017-January, p. 2701-2709 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Stabilization
Pixels
Optical flows
Computational complexity
Experiments

Easy-to-use 3D printer for fabrication of biological scaffolds

Armstrong, A., Alleyne, A. & Johnson, A. W. Jan 1 2017 Mechatronics; Estimation and Identification; Uncertain Systems and Robustness; Path Planning and Motion Control; Tracking Control Systems; Multi-Agent and Networked Systems; Manufacturing; Intelligent Transportation and Vehicles; Sensors and Actuators; Diagnostics and Detection; Unmanned, Ground and Surface Robotics; Motion and Vibration Control Applications. American Society of Mechanical Engineers, Vol. 2

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3D printers
Scaffolds
Bone
Fabrication
Motion control

Efficient lasing on Alkali atomic D2 lines utilizing spin-polarized Alkali Vapor

Mironov, A. E., Steinforth, A., Rivera, J. A. & Gary Eden, J. Jan 1 2017 Frontiers in Optics, FiO 2017. OSA - The Optical Society, Vol. Part F66-FiO 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Alkalies
Vapors
Noble Gases
Pumping (laser)
Inert gases

Enhancing resolution and contrast in second-harmonic generation microscopy using an advanced maximum likelihood estimation restoration method

Sivaguru, M., Kabir, M. M., Gartia, M. R., Biggs, D. S. C., Sivaguru, B. S., Sivaguru, V. A., Berent, Z. T., Wagoner Johnson, A. J., Fried, G. A., Liu, G. L., Sadayappan, S. & Toussaint, K. C. Jan 1 2017 Multiphoton Microscopy in the Biomedical Sciences XVII. SPIE, Vol. 10069, 1006908

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Maximum likelihood estimation
Harmonic generation
restoration
Restoration
Microscopy

Enhancing searches for optimal trees using SIESTA

Vachaspati, P. & Warnow, T. Jan 1 2017 Comparative Genomics - 15th International Workshop, RECOMB CG 2017, Proceedings. Springer-Verlag, p. 232-255 24 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10562 LNBI)

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Trees (mathematics)
Dynamic programming
Set theory
Data structures
Polynomials

Exploring plasmonic nanoantenna arrays as a platform for biosensing

Toussaint, K. C. 2017 Biosensing and Nanomedicine X. SPIE, Vol. 10352, 1035206

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biosensing
Plasmonics
platforms
Sensing
Lab-on-a-chip

FRET lasers using biotin-streptavidin bioconjugates and characteristics of fluorescent protein lasers

Rivera, J. A. & Gary Eden, J. Jan 23 2017 2016 IEEE Photonics Conference, IPC 2016. Institute of Electrical and Electronics Engineers Inc., p. 376-377 2 p. 7831144

Research output: Chapter in Book/Report/Conference proceedingConference contribution

biotin
proteins
Proteins
Stimulated emission
Lasers

Gene tree parsimony for incomplete gene trees

Bayzid, M. S. & Warnow, T. Aug 1 2017 17th International Workshop on Algorithms in Bioinformatics, WABI 2017. Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, Vol. 88, 2

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genes
Sampling
Dynamic programming

High-speed two-photon fluorescence lifetime imaging microscopy of NADH for label-free metabolic imaging

Bower, A. J., Li, J., Chaney, E. J., Marjanovic, M. & Boppart, S. A. 2017 Optical Molecular Probes, Imaging and Drug Delivery, OMP 2017. OSA - The Optical Society, Vol. Part F63-OMP 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

NAD
Labels
Microscopic examination
Photons
Fluorescence

Hybrid microlaser resonators stabilized by spherical waveguides or unicellular organisms

Rivera, J. A., Galvin, T. C. & Eden, J. G. Jan 1 2017 Laser Science, LS 2017. OSA - The Optical Society, Vol. Part F68-LS 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Resonators
Waveguides
Topology
Lasers
Composite materials

Imaging spatially varying biomechanical properties with neural networks

Hoerig, C., Reyes, W., Fabre, L., Ghaboussi, J. & Insana, M. F. Jan 1 2017 Medical Imaging 2017: Ultrasonic Imaging and Tomography. SPIE, Vol. 10139, 1013905

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Elasticity Imaging Techniques
Elastic Modulus
Neural networks
Imaging techniques
Finite Element Analysis

Integration of linear variable filters on CMOS for compact emission and absorption sensing

Carlson, J. A., Wan, Y., Kesler, B. A., Peng, W., Al-Mulla, S. A., Su, P., Dallesasse, J. M. & Cunningham, B. T. Jan 5 2017 IEEE Sensors, SENSORS 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7808414

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spectrometers
Fluorescence
Spectrum analyzers
Spectral resolution
Chlorine

Intensified surface enhanced Raman signal of a graphene monolayer on a plasmonic substrate through the use of fluidic dielectrics

Mahigir, A., Gartia, M. R., Chang, T. W., Liu, G. L. & Veronis, G. 2017 Plasmonics in Biology and Medicine XIV. SPIE, Vol. 10080, 1008005

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Graphite
Raman Spectrum Analysis
fluidics
Fluidics
Graphene

In-vivo study of quantitative ultrasound parameters in fatty rabbit livers

Nguyen, T., Podkowa, A., Miller, R., Do, M. & Oelze, M. Oct 31 2017 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092517

Research output: Chapter in Book/Report/Conference proceedingConference contribution

rabbits
liver
fats
S waves
ultrasonics

In-vivo study of quantitative ultrasound parameters in fatty rabbit livers

Nguyen, T., Podkowa, A., Miller, R. J., Oelze, M. L. & Do, M. Oct 31 2017 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8091693

Research output: Chapter in Book/Report/Conference proceedingConference contribution

rabbits
liver
fats
principal components analysis
attenuation

Joint Adaptive Sparsity and Low-Rankness on the Fly: An Online Tensor Reconstruction Scheme for Video Denoising

Wen, B., Li, Y., Pfister, L. & Bresler, Y. Dec 22 2017 Proceedings - 2017 IEEE International Conference on Computer Vision, ICCV 2017. Institute of Electrical and Electronics Engineers Inc., Vol. 2017-October, p. 241-250 10 p. 8237297

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tensors
Video streaming
Processing
Experiments

Label-free tomography of strongly scattering specimens

Popescu, G. 2017 Digital Holography and Three-Dimensional Imaging, DH 2017. OSA - The Optical Society, Vol. Part F47-DH 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tomography
Labels
Multiple scattering
Scattering
Imaging techniques

Microscale transport physics during atomic force microscopy mass spectrometry and improved sampling efficiency

Moon, H., Comi, T. J., Dunham, S. J. B., Kwon, B., Sweedler, J. V. & King, W. P. Jul 26 2017 TRANSDUCERS 2017 - 19th International Conference on Solid-State Sensors, Actuators and Microsystems. Institute of Electrical and Electronics Engineers Inc., p. 24-27 4 p. 7993978

Research output: Chapter in Book/Report/Conference proceedingConference contribution

microbalances
Mass spectrometry
Atomic force microscopy
mass spectroscopy
Physics

Multiple-beam generation from a single-cavity titanium-sapphire thin-disk laser

Steinforth, A. W., Rivera, J. A. & Eden, J. G. Jan 1 2017 Laser Science, LS 2017. OSA - The Optical Society, Vol. Part F68-LS 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microlenses
Videodisks
Aluminum Oxide
Titanium
Sapphire

Nanofiller geometry effects on electrical properties of composites

Karimi, P., Kale, S., Sabet, F. A., Ostoja-Starzewski, M. & Jasiuk, I. Jan 1 2017 32nd Technical Conference of the American Society for Composites 2017. DEStech Publications Inc., Vol. 3, p. 2237-2252 16 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fillers
Aspect ratio
Electric properties
Hydrocarbon refining
Geometry

Optimal clutter filtering for improved perfusion sensitivity

Kim, M., Hedhli, J., Dobrucki, L., Abbey, C. & Insana, M. Oct 31 2017 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092680

Research output: Chapter in Book/Report/Conference proceedingConference contribution

clutter
blood
decomposition
blood cells
sensitivity

Optimal completion of incomplete gene trees in polynomial time using OCTAL

Christensen, S., Molloy, E. K., Vachaspati, P. & Warnow, T. Aug 1 2017 17th International Workshop on Algorithms in Bioinformatics, WABI 2017. Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, Vol. 88, 27

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genes
Polynomials
Binary trees

Optimal filtering for improved perfusion sensitivity

Kim, M., Hedhli, J., Dobrucki, L. W., Abbey, C. K. & Insana, M. F. Oct 31 2017 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8091615

Research output: Chapter in Book/Report/Conference proceedingConference contribution

clutter
blood flow
sensitivity
echoes
augmentation

Photonic crystal coupled plasmonic hybrid nanosensors

Liu, J. N., Liu, K. K., Huang, Q., Singamaneni, S. & Cunningham, B. T. Jan 23 2017 2016 IEEE Photonics Conference, IPC 2016. Institute of Electrical and Electronics Engineers Inc., p. 198-199 2 p. 7831038

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanosensors
Photonic crystals
photonics
crystals
Nanorods

Porous photonic crystal external cavity laser biosensor for drug screening

Huang, Q., Peh, J., Hergenrother, P. J. & Cunningham, B. T. Jan 5 2017 IEEE Sensors, SENSORS 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7808619

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Laser resonators
Photonic crystals
Biosensors
Screening
Wavelength

Quantitative label-free imaging of live-cell adhesion using photonic crystal enhanced microscopy (PCEM)

Zhuo, Y., Choi, J. S., Marin, T., Yu, H., Harley, B. A. & Cunningham, B. T. Oct 25 2017 2017 Conference on Lasers and Electro-Optics, CLEO 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2017-January, p. 1-2 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cell adhesion
Photonic crystals
Labels
Microscopic examination
adhesion

Quantitative label-free imaging of live-cell adhesion using Photonic Crystal Enhanced Microscopy (PCEM)

Zhuo, Y., Choi, J. S., Marin, T., Yu, H., Harley, B. A. & Cunningham, B. T. Jan 1 2017 CLEO: Science and Innovations, CLEO_SI 2017. OSA - The Optical Society, Vol. Part F41-CLEO_SI 2017

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cell adhesion
Photonic crystals
Labels
Microscopic examination
Imaging techniques