Research Output

2020

Aberrant Expression of a Non-muscle RBFOX2 Isoform Triggers Cardiac Conduction Defects in Myotonic Dystrophy

Misra, C., Bangru, S., Lin, F., Lam, K., Koenig, S. N., Lubbers, E. R., Hedhli, J., Murphy, N. P., Parker, D. J., Dobrucki, L. W., Cooper, T. A., Tajkhorshid, E., Mohler, P. J. & Kalsotra, A., Mar 23 2020, In : Developmental cell. 52, 6, p. 748-763.e6

Research output: Contribution to journalArticle

Active transcytosis and new opportunities for cancer nanomedicine

Pandit, S., Dutta, D. & Nie, S., May 1 2020, In : Nature Materials. 19, 5, p. 478-480 3 p.

Research output: Contribution to journalComment/debate

Acute PFOA exposure promotes epigenomic alterations in mouse kidney tissues

Rashid, F., Ramakrishnan, A., Fields, C. & Irudayaraj, J., 2020, In : Toxicology Reports. 7, p. 125-132 8 p.

Research output: Contribution to journalArticle

Open Access

Additional salt bridges improve the thermostability of 1,4-α-glucan branching enzyme

Ban, X., Wu, J., Kaustubh, B., Lahiri, P., Dhoble, A. S., Gu, Z., Li, C., Cheng, L., Hong, Y., Tong, Y. & Li, Z., Jun 30 2020, In : Food chemistry. 316, 126348.

Research output: Contribution to journalArticle

A ferredoxin-dependent dihydropyrimidine dehydrogenase in Clostridium chromiireducens

Wang, F., Wei, Y., Lu, Q., Ang, E. L., Zhao, H. & Zhang, Y., Jul 31 2020, In : Bioscience Reports. 40, 7

Research output: Contribution to journalArticle

Open Access

A genetic toolbox for metabolic engineering of Issatchenkia orientalis

Cao, M., Fatma, Z., Song, X., Hsieh, P. H., Tran, V. G., Lyon, W. L., Sayadi, M., Shao, Z., Yoshikuni, Y. & Zhao, H., May 2020, In : Metabolic Engineering. 59, p. 87-97 11 p.

Research output: Contribution to journalArticle

A golden time for nanotechnology

Chang, H. H., Gole, M. T. & Murphy, C. J., May 1 2020, In : MRS Bulletin. 45, 5, p. 387-393 7 p.

Research output: Contribution to journalArticle

All-digital histopathology by infrared-optical hybrid microscopy

Schnell, M., Mittal, S., Falahkheirkhah, K., Mittal, A., Yeh, K., Kenkel, S., Kajdacsy-Balla, A., Carney, P. S. & Bhargava, R., Feb 18 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 7, p. 3388-3396 9 p., 201912400.

Research output: Contribution to journalArticle

Altered Hippocampal Epigenetic Regulation Underlying Reduced Cognitive Development in Response to Early Life Environmental Insults

Schachtschneider, K. M., Welge, M. E., Auvil, L., Chaki, S., Rund, L. A., Madsen, O., Elmore, M. R. P., Johnson, R. W., Groenen, M. A. M. & Schook, L. B., Feb 4 2020, In : Genes. 11, 2, 162.

Research output: Contribution to journalArticle

Open Access

A mass spectrometry-based high-throughput screening method for engineering fatty acid synthases with improved production of medium-chain fatty acids

Xue, P., Si, T., Mishra, S., Zhang, L., Choe, K., Sweedler, J. V. & Zhao, H., Jul 1 2020, In : Biotechnology and bioengineering. 117, 7, p. 2131-2138 8 p.

Research output: Contribution to journalArticle

An Activity-Based Sensing Approach for the Detection of Cyclooxygenase-2 in Live Cells

Yadav, A. K., Reinhardt, C. J., Arango, A. S., Huff, H. C., Dong, L., Malkowski, M. G., Das, A., Tajkhorshid, E. & Chan, J., Feb 17 2020, In : Angewandte Chemie - International Edition. 59, 8, p. 3307-3314 8 p.

Research output: Contribution to journalArticle

A New Biosensor for Stilbenes and a Cannabinoid Enabled by Genome Mining of a Transcriptional Regulator

Sun, H., Zhao, H. & Ang, E. L., Apr 17 2020, In : ACS synthetic biology. 9, 4, p. 698-705 8 p.

Research output: Contribution to journalArticle

A Newly Synthesized Tris(crown ether) Ionophore for Assisted Ion Transfer at NanoITIES Electrodes

Chen, R., Yang, A., Chang, A., Oweimrin, P. F., Romero, J., Vichitcharoenpaisarn, P., Tapia, S., Ha, K., Villaflor, C. & Shen, M., Feb 17 2020, In : ChemElectroChem. 7, 4, p. 967-974 8 p.

Research output: Contribution to journalArticle

An innovative multistage anaerobic hythane reactor (MAHR): Metabolic flux, thermodynamics and microbial functions

Si, B., Yang, H., Huang, S., Watson, J., Zhang, Y. & Liu, Z., Feb 1 2020, In : Water Research. 169, 115216.

Research output: Contribution to journalArticle

Anisotropic mineralized collagen scaffolds accelerate osteogenic response in a glycosaminoglycan-dependent fashion

Dewey, M. J., Nosatov, A. V., Subedi, K. & Harley, B., Apr 21 2020, In : RSC Advances. 10, 26, p. 15629-15641 13 p.

Research output: Contribution to journalArticle

Open Access

Anomaly detection in traffic surveillance videos with GAN-based future frame prediction

Nguyen, K. T., Dinh, D. T., Do, M. N. & Tran, M. T., Jun 8 2020, ICMR 2020 - Proceedings of the 2020 International Conference on Multimedia Retrieval. Association for Computing Machinery, Inc, p. 457-463 7 p. (ICMR 2020 - Proceedings of the 2020 International Conference on Multimedia Retrieval).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Antioxidant Therapies in Traumatic Brain Injury

Pietro, V. D., Yakoub, K. M., Caruso, G., Lazzarino, G., Signoretti, S., Barbey, A. K., Tavazzi, B., Lazzarino, G., Belli, A. & Amorini, A. M., Mar 22 2020, In : Antioxidants. 9, 3, 260.

Research output: Contribution to journalReview article

Open Access

A partial-dithering strategy for edge-illumination X-ray phase-contrast tomography enabled by a joint reconstruction method

Chen, Y., Hagen, C. K., Olivo, A. & Anastasio, M. A., May 21 2020, In : Physics in medicine and biology. 65, 10, 105007.

Research output: Contribution to journalArticle

A Pathway for Degradation of Uracil to Acetyl Coenzyme A in Bacillus megaterium

Zhu, D., Wei, Y., Yin, J., Liu, D., Ang, E. L., Zhao, H. & Zhang, Y., Mar 18 2020, In : Applied and environmental microbiology. 86, 7

Research output: Contribution to journalArticle

A photo-regulated aptamer sensor for spatiotemporally controlled monitoring of ATP in the mitochondria of living cells

Hong, S., Zhang, X., Lake, R. J., Pawel, G. T., Guo, Z., Pei, R. & Lu, Y., Jan 1 2020, In : Chemical Science. 11, 3, p. 713-720 8 p.

Research output: Contribution to journalArticle

Open Access

A Physics-Motivated DNN for X-Ray CT Scatter Correction

Iskender, B. & Bresler, Y., Apr 2020, ISBI 2020 - 2020 IEEE International Symposium on Biomedical Imaging. IEEE Computer Society, p. 609-613 5 p. 9098512. (Proceedings - International Symposium on Biomedical Imaging; vol. 2020-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A preclinical small animal imaging platform combining multi-angle photoacoustic and fluorescence projections into co-registered 3D maps

Thompson, W., Yu, A., Dumani, D. S., Cook, J., Anastasio, M. A., Emelianov, S. Y. & Ermilov, S. A., 2020, Photons Plus Ultrasound: Imaging and Sensing 2020. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 112400L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11240).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Artificial water channels enable fast and selective water permeation through water-wire networks

Song, W., Joshi, H., Chowdhury, R., Najem, J. S., Shen, Y. X., Lang, C., Henderson, C. B., Tu, Y. M., Farell, M., Pitz, M. E., Maranas, C. D., Cremer, P. S., Hickey, R. J., Sarles, S. A., Hou, J. L., Aksimentiev, A. & Kumar, M., Jan 1 2020, In : Nature Nanotechnology. 15, 1, p. 73-79 7 p.

Research output: Contribution to journalArticle

Assessing the Effect of Middle Ear Effusions on Wideband Acoustic Immittance Using Optical Coherence Tomography

Won, J., Monroy, G. L., Huang, P. C., Hill, M. C., Novak, M. A., Porter, R. G., Spillman, D. R., Chaney, E. J., Barkalifa, R. & Boppart, S. A., Jul 1 2020, In : Ear and hearing. p. 811-824 14 p.

Research output: Contribution to journalArticle

Assessing the severity of psoriasis through multivariate analysis of optical images from non-lesional skin

Žurauskas, M., Barkalifa, R., Alex, A., Marjanovic, M., Spillman, D. R., Mukherjee, P., Neitzel, C. D., Lee, W., Medler, J., Arp, Z., Cleveland, M., Hood, S. & Boppart, S. A., Dec 1 2020, In : Scientific reports. 10, 1, 9154.

Research output: Contribution to journalArticle

Open Access

Automation and flow control for particle manipulation

Kumar, D., Shenoy, A., Deutsch, J. & Schroeder, C. M., Sep 2020, In : Current Opinion in Chemical Engineering. 29, p. 1-8 8 p.

Research output: Contribution to journalReview article

Bacterial 1,4-α-glucan branching enzymes: characteristics, preparation and commercial applications

Ban, X., Dhoble, A. S., Li, C., Gu, Z., Hong, Y., Cheng, L., Holler, T. P., Kaustubh, B. & Li, Z., Apr 2 2020, In : Critical Reviews in Biotechnology. 40, 3, p. 380-396 17 p.

Research output: Contribution to journalReview article

Biodegradable Polyanhydrides as Encapsulation Layers for Transient Electronics

Choi, Y. S., Koo, J., Lee, Y. J., Lee, G., Avila, R., Ying, H., Reeder, J., Hambitzer, L., Im, K., Kim, J., Lee, K. M., Cheng, J., Huang, Y., Kang, S. K. & Rogers, J. A., Jan 1 2020, (Accepted/In press) In : Advanced Functional Materials.

Research output: Contribution to journalArticle

Biokinetic and biotransformation of nitrogen during photosynthetic bacteria wastewater treatment

Lu, H., Peng, M., Zhang, G., Song, H., Yang, A. & Zhang, Y., Jul 2 2020, In : Environmental Technology (United Kingdom). 41, 15, p. 1888-1895 8 p.

Research output: Contribution to journalArticle

Biological upgrading of 3,6-anhydro-l-galactose from agarose to a new platform chemical

Kim, D. H., Liu, J. J., Lee, J. W., Pelton, J. G., Yun, E. J., Yu, S., Jin, Y. S. & Kim, K. H., Mar 7 2020, In : Green Chemistry. 22, 5, p. 1776-1785 10 p.

Research output: Contribution to journalArticle

Biomedical Imaging and Analysis in the Age of Big Data and Deep Learning

Duncan, J. S., Insana, M. F. & Ayache, N., Jan 2020, In : Proceedings of the IEEE. 108, 1, p. 3-10 8 p., 8944337.

Research output: Contribution to journalArticle

Biosynthetic engineering of the antifungal, anti-MRSA auroramycin

Yeo, W. L., Heng, E., Tan, L. L., Lim, Y. W., Ching, K. C., Tsai, D. J., Jhang, Y. W., Lauderdale, T. L., Shia, K. S., Zhao, H., Ang, E. L., Zhang, M. M., Lim, Y. H. & Wong, F. T., Jan 6 2020, In : Microbial cell factories. 19, 1, 3.

Research output: Contribution to journalArticle

Open Access

Biosystems design by directed evolution

Wang, Y., Yu, X. & Zhao, H., Mar 1 2020, In : AIChE Journal. 66, 3, e16716.

Research output: Contribution to journalReview article

Body mass and cardiorespiratory fitness are associated with altered brain metabolism

Larsen, R. J., Raine, L. B., Hillman, C. H., Kramer, A. F., Cohen, N. J. & Barbey, A. K., Apr 29 2020, (Accepted/In press) In : Metabolic Brain Disease.

Research output: Contribution to journalArticle

Catalytic Microgelators for Decoupled Control of Gelation Rate and Rigidity of the Biological Gels

Hong, Y. T., Bregante, D. T., Lee, J. C. W., Seo, Y., Kim, D. H., Lee, Y. J., Schook, L. B., Jeon, H., Sung, H. J., Flaherty, D. W., Rogers, S. A. & Kong, H., Jan 10 2020, In : Journal of Controlled Release. 317, p. 166-180 15 p.

Research output: Contribution to journalArticle

Open Access
Open Access

Charge Transport in Sequence-Defined Conjugated Oligomers

Yu, H., Li, S., Schwieter, K. E., Liu, Y., Sun, B., Moore, J. S. & Schroeder, C. M., Mar 11 2020, In : Journal of the American Chemical Society. 142, 10, p. 4852-4861 10 p.

Research output: Contribution to journalArticle

Checkpoint enrichment for sensitive detection of target bacteria from large volume of food matrices

Ren, W., Cabush, A. & Irudayaraj, J., Aug 29 2020, In : Analytica Chimica Acta. 1127, p. 114-121 8 p.

Research output: Contribution to journalArticle

Chemistry, Bioengineering, or the Medical Sciences: Where Do Our Manuscripts Come From?

Sweedler, J. V., 2020, (Accepted/In press) In : Analytical chemistry.

Research output: Contribution to journalEditorial

Open Access

Chevron-type graphene nanoribbons with a reduced energy band gap: Solution synthesis, scanning tunneling microscopy and electrical characterization

Liu, X., Li, G., Lipatov, A., Sun, T., Mehdi Pour, M., Aluru, N. R., Lyding, J. W. & Sinitskii, A., Jun 1 2020, In : Nano Research. 13, 6, p. 1713-1722 10 p.

Research output: Contribution to journalArticle

Circadian rhythm of redox state regulates membrane excitability in hippocampal CA1 neurons

Naseri Kouzehgarani, G., Bothwell, M. Y. & Gillette, M. U., Jan 1 2020, In : European Journal of Neuroscience. 51, 1, p. 34-46 13 p.

Research output: Contribution to journalArticle

Civil disobedience movements such as School Strike for the Climate are raising public awareness of the climate change emergency

Thackeray, S. J., Robinson, S. A., Smith, P., Bruno, R., Kirschbaum, M. U. F., Bernacchi, C., Byrne, M., Cheung, W., Cotrufo, M. F., Gienapp, P., Hartley, S., Janssens, I., Hefin Jones, T., Kobayashi, K., Luo, Y., Penuelas, J., Sage, R., Suggett, D. J., Way, D. & Long, S., Mar 1 2020, In : Global change biology. 26, 3, p. 1042-1044 3 p.

Research output: Contribution to journalEditorial

Open Access

Closed-loop atomic force microscopy-infrared spectroscopic imaging for nanoscale molecular characterization

Kenkel, S., Mittal, S. & Bhargava, R., Dec 1 2020, In : Nature communications. 11, 1, 3225.

Research output: Contribution to journalArticle

Open Access

Compact quantum dots for quantitative cytology

Le, P., Chitoor, S., Tu, C., Lim, S. J. & Smith, A. M., Jan 1 2020, Methods in Molecular Biology. Humana Press Inc., p. 147-158 12 p. (Methods in Molecular Biology; vol. 2064).

Research output: Chapter in Book/Report/Conference proceedingChapter

Comparative effects of N-cadherin protein and peptide fragments on mesenchymal stem cell mechanotransduction and paracrine function

Qin, E. C., Ahmed, S. T., Sehgal, P., Vu, V. H., Kong, H. & Leckband, D. E., May 2020, In : Biomaterials. 239, 119846.

Research output: Contribution to journalArticle

Comparative Pharmacokinetics of Δ9-Tetrahydrocannabinol in Adolescent and Adult Male Mice

Torrens, A., Vozella, V., Huff, H., McNeil, B., Ahmed, F., Ghidini, A., Mahler, S. V., Huestis, M. A., Das, A. & Piomelli, D., Jul 1 2020, In : Journal of Pharmacology and Experimental Therapeutics. 374, 1, p. 151-160 10 p.

Research output: Contribution to journalArticle

Open Access

Comparison of data-acquisition designs for single-shot edge-illumination X-ray phase-contrast tomography

Chen, Y., Zhou, W., Hagen, C. K., Olivo, A. & Anastasio, M. A., Jan 1 2020, In : Optics Express. 28, 1, p. 1-19 19 p.

Research output: Contribution to journalArticle

Computational Dissection of Membrane Transport at a Microscopic Level

Jiang, T., Wen, P. C., Trebesch, N., Zhao, Z., Pant, S., Kapoor, K., Shekhar, M. & Tajkhorshid, E., Mar 2020, In : Trends in Biochemical Sciences. 45, 3, p. 202-216 15 p.

Research output: Contribution to journalReview article

Computational optical imaging goes viral

Goda, K., Popescu, G., Tsia, K. K. & Psaltis, D., Mar 1 2020, In : AIP Advances. 5, 3, 030401.

Research output: Contribution to journalEditorial

Open Access