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2009

Molecular dynamics simulations of membrane channels and transporters

Khalili-Araghi, F., Gumbart, J., Wen, P. C., Sotomayor, M., Tajkhorshid, E. & Schulten, K., Apr 1 2009, In : Current Opinion in Structural Biology. 19, 2, p. 128-137 10 p.

Research output: Contribution to journalReview article

Polyphosphate and omptins: Novel bacterial procoagulant agents

Yun, T. H. & Morrissey, J. H., Oct 1 2009, In : Journal of Cellular and Molecular Medicine. 13, 10, p. 4146-4153 8 p.

Research output: Contribution to journalReview article

Protein-membrane interactions: Blood clotting on nanoscale bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Rienstra, C. M., Kijac, A. Z., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 4 2009, In : Journal of Thrombosis and Haemostasis. 7, SUPPL. 1, p. 169-172 4 p.

Research output: Contribution to journalReview article

T-cell receptor binding affinities and kinetics: impact on T-cell activity and specificity

Stone, J. D., Chervin, A. S. & Kranz, D. M., Feb 1 2009, In : Immunology. 126, 2, p. 165-176 12 p.

Research output: Contribution to journalReview article

The mechanism of ABC transporters: General lessons from structural and functional studies of an antigenic peptide transporter

Procko, E., O'Mara, M. L., Drew Bennett, W. F., Peter Tieleman, D. & Gaudet, R., May 1 2009, In : FASEB Journal. 23, 5, p. 1287-1302 16 p.

Research output: Contribution to journalReview article

2008

Blood clotting reactions on nanoscale phospholipid bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 6 2008, In : Thrombosis Research. 122, SUPPL.1, p. S23-S26

Research output: Contribution to journalReview article

Cytochrome c oxidase: Exciting progress and remaining mysteries

Brzezinski, P. & Gennis, R. B., Oct 1 2008, In : Journal of Bioenergetics and Biomembranes. 40, 5, p. 521-531 11 p.

Research output: Contribution to journalReview article

Tissue factor and factor VIIa: Understanding the molecular mechanism

Morrissey, J. & Mackman, N., 2008, In : Thrombosis Research. 122, SUPPL.1, p. S1-S2

Research output: Contribution to journalReview article

2007

Applications of phospholipid bilayer nanodiscs in the study of membranes and membrane proteins

Nath, A., Atkins, W. M. & Sligar, S. G., Feb 27 2007, In : Biochemistry. 46, 8, p. 2059-2069 11 p.

Research output: Contribution to journalReview article

Display, engineering, and applications of antigen-specific T cell receptors

Richman, S. A. & Kranz, D. M., Oct 1 2007, In : Biomolecular Engineering. 24, 4, p. 361-373 13 p.

Research output: Contribution to journalReview article

Encryption remains cryptic

Morrissey, J. H., Dec 1 2007, In : Blood. 110, 12, p. 3822-3823 2 p.

Research output: Contribution to journalReview article

Lantibiotics: Peptides of diverse structure and function

Willey, J. M. & van der Donk, W. A., Nov 14 2007, In : Annual review of microbiology. 61, p. 477-501 25 p.

Research output: Contribution to journalReview article

Understanding cooperativity in human P450 mediated drug-drug interactions

Sligar, S. G. & Denisov, I. G., Apr 1 2007, In : Drug Metabolism Reviews. 39, 2-3, p. 567-579 13 p.

Research output: Contribution to journalReview article

2006

A bacterium that has three pathways to regulate membrane lipid fluidity

Cronan, J. E., Apr 1 2006, In : Molecular Microbiology. 60, 2, p. 256-259 4 p.

Research output: Contribution to journalReview article

Arabidopsis cytochrome P450s through the looking glass: A window on plant biochemistry

Schuler, M. A., Duan, H., Bilgin, M. & Ali, S., Jun 1 2006, In : Phytochemistry Reviews. 5, 2-3, p. 205-237 33 p.

Research output: Contribution to journalReview article

Cytochrome P450 4F subfamily: At the crossroads of eicosanoid and drug metabolism

Kalsotra, A. & Strobel, H. W., Dec 1 2006, In : Pharmacology and Therapeutics. 112, 3, p. 589-611 23 p.

Research output: Contribution to journalReview article

Evolution of enzyme superfamilies

Glasner, M. E., Gerlt, J. A. & Babbitt, P. C., Oct 1 2006, In : Current Opinion in Chemical Biology. 10, 5, p. 492-497 6 p.

Research output: Contribution to journalReview article

Heterologous expression and strategies for encapsulation of membrane-localized plant P450s

Duan, H. & Schuler, M. A., Jun 1 2006, In : Phytochemistry Reviews. 5, 2-3, p. 507-523 17 p.

Research output: Contribution to journalReview article

Homology modeling of plant cytochrome P450s

Rupasinghe, S. & Schuler, M. A., Jun 1 2006, In : Phytochemistry Reviews. 5, 2-3, p. 473-505 33 p.

Research output: Contribution to journalReview article

Lighting up the nascent cell wall.

van der Donk, W. A., Aug 22 2006, In : ACS chemical biology. 1, 7, p. 425-428 4 p.

Research output: Contribution to journalReview article

Rings, radicals, and regeneration: The early years of a bioorganic laboratory

van der Donk, W. A., Dec 22 2006, In : Journal of Organic Chemistry. 71, 26, p. 9561-9571 11 p.

Research output: Contribution to journalReview article

Structural aspects of interactions within the Myc/Max/Mad network

Nair, S. K. & Burley, S. K., Feb 27 2006, In : Current Topics in Microbiology and Immunology. 302, p. 123-143 21 p.

Research output: Contribution to journalReview article

The status of high-valent metal oxo complexes in the P450 cytochromes

Makris, T. M., Koenig, K. V., Schlichting, I. & Sligar, S. G., Apr 1 2006, In : Journal of Inorganic Biochemistry. 100, 4, p. 507-518 12 p.

Research output: Contribution to journalReview article

Transmembrane proton translocation by cytochrome c oxidase

Brändén, G., Gennis, R. B. & Brzezinski, P., Aug 1 2006, In : Biochimica et Biophysica Acta - Bioenergetics. 1757, 8, p. 1052-1063 12 p.

Research output: Contribution to journalReview article

Water as a cofactor in the unidirectional light-driven proton transfer steps in bacteriorhodopsin

Maeda, A., Morgan, J. E., Gennis, R. B. & Ebrey, T. G., Nov 1 2006, In : Photochemistry and Photobiology. 82, 6, p. 1398-1405 8 p.

Research output: Contribution to journalReview article

2005

Biosynthesis and mode of action of lantibiotics

Chatterjee, C., Paul, M., Xie, L. & van der Donk, W. A., Feb 1 2005, In : Chemical reviews. 105, 2, p. 633-683 51 p.

Research output: Contribution to journalReview article

Chemical and enzymatic synthesis of lanthionines

Paul, M. & van der Donk, W. A., Jan 1 2005, In : Mini-Reviews in Organic Chemistry. 2, 1, p. 23-37 15 p.

Research output: Contribution to journalReview article

Function, attachment and synthesis of lipoic acid in Escherichia coli

Cronan, J. E., Zhao, X. & Jiang, Y., Oct 17 2005, In : Advances in Microbial Physiology. 50, p. 103-146 44 p.

Research output: Contribution to journalReview article

Mechanism and applications of phosphite dehydrogenase

Relyea, H. A. & Van Der Donk, W. A., Jun 2005, In : Bioorganic Chemistry. 33, 3, p. 171-189 19 p.

Research output: Contribution to journalReview article

Molecular dynamics simulations of proteins in lipid bilayers

Gumbart, J., Wang, Y., Aksimentiev, A., Tajkhorshid, E. & Schulten, K., Aug 1 2005, In : Current Opinion in Structural Biology. 15, 4, p. 423-431 9 p.

Research output: Contribution to journalReview article

New developments in lantibiotic biosynthesis and mode of action

Patton, G. C. & Van Der Donk, W. A., Oct 1 2005, In : Current Opinion in Microbiology. 8, 5, p. 543-551 9 p.

Research output: Contribution to journalReview article

Renal localization, expression, and developmental regulation of P450 4F cytochromes in three substrains of spontaneously hypertensive rats

Kalsotra, A., Cui, X., Anakk, S., Hinojos, C. A., Doris, P. A. & Strobel, H. W., Dec 9 2005, In : Biochemical and Biophysical Research Communications. 338, 1, p. 423-431 9 p.

Research output: Contribution to journalReview article

Scalable molecular dynamics with NAMD

Phillips, J. C., Braun, R., Wang, W., Gumbart, J., Tajkhorshid, E., Villa, E., Chipot, C., Skeel, R. D., Kalé, L. & Schulten, K., Dec 2005, In : Journal of Computational Chemistry. 26, 16, p. 1781-1802 22 p.

Research output: Contribution to journalReview article

Structure and chemistry of cytochrome P450

Denisov, I. G., Makris, T. M., Sligar, S. G. & Schlichting, I., Jun 1 2005, In : Chemical reviews. 105, 6, p. 2253-2277 25 p.

Research output: Contribution to journalReview article

Thirty years of microbial P450 monooxygenase research: Peroxo-heme intermediates - The central bus station in heme oxygenase catalysis

Sligar, S. G., Makris, T. M. & Denisov, I. G., Dec 9 2005, In : Biochemical and Biophysical Research Communications. 338, 1, p. 346-354 9 p.

Research output: Contribution to journalReview article

2004

A Planning Strategy for Diversity-Oriented Synthesis

Burke, M. D. & Schreiber, S. L., Dec 22 2004, In : Angewandte Chemie - International Edition. 43, 1, p. 46-58 13 p.

Research output: Contribution to journalReview article

Coupled proton and electron transfer reactions in cytochrome oxidase

Gennis, R. B., Jan 1 2004, In : Frontiers in Bioscience. 9, p. 581-591 11 p.

Research output: Contribution to journalReview article

De novo proteins from designed combinatorial libraries

Hecht, M. H., Das, A., Go, A., Bradley, L. H. & Wei, Y., Jul 1 2004, In : Protein Science. 13, 7, p. 1711-1723 13 p.

Research output: Contribution to journalReview article

Diversity in chemotaxis mechanisms among the bacteria and archaea

Szurmant, H. & Ordal, G. W., Jun 1 2004, In : Microbiology and Molecular Biology Reviews. 68, 2, p. 301-319 19 p.

Research output: Contribution to journalReview article

Effect of loss of CheC and other adaptational proteins on chemotactic behaviour in Bacillus subtilis

Saulmon, M. M., Karatan, E. & Ordal, G. W., Mar 2004, In : Microbiology. 150, 3, p. 581-589 9 p.

Research output: Contribution to journalReview article

FTIR studies of internal proton transfer reactions linked to inter-heme electron transfer in bovine cytochrome c oxidase

McMahon, B. H., Fabian, M., Tomson, F., Causgrove, T. P., Bailey, J. A., Rein, F. N., Dyer, R. B., Palmer, G., Gennis, R. B. & Woodruff, W. H., Apr 12 2004, In : Biochimica et Biophysica Acta - Bioenergetics. 1655, 1-3, p. 321-331 11 p.

Research output: Contribution to journalReview article

Post-translational modifications during lantibiotic biosynthesis

Xie, L. & Van Der Donk, W. A., Oct 1 2004, In : Current Opinion in Chemical Biology. 8, 5, p. 498-507 10 p.

Research output: Contribution to journalReview article

Shaping the nuclear action of NF-κB

Chen, L. F. & Greene, W. C., May 1 2004, In : Nature Reviews Molecular Cell Biology. 5, 5, p. 392-401 10 p.

Research output: Contribution to journalReview article

Tissue Factor: A Key Molecule in Hemostatic and Nonhemostatic Systems

Morrissey, J. H., Feb 2004, In : International Journal of Hematology. 79, 2, p. 103-108 6 p.

Research output: Contribution to journalReview article

2003

A model T-cell receptor system for studying memory T-cell development

Chen, J., Eisen, H. N. & Kranz, D. M., Mar 1 2003, In : Microbes and Infection. 5, 3, p. 233-240 8 p.

Research output: Contribution to journalReview article

Bacterial Membrane Lipids: Where Do We Stand?

Cronan, J. E., Nov 20 2003, In : Annual review of microbiology. 57, p. 203-224 22 p.

Research output: Contribution to journalReview article

Comparison of the properties of prostaglandin H synthase-1 and -2

Kulmacz, R. J., Van Der Donk, W. A. & Tsai, A. L., Sep 2003, In : Progress in Lipid Research. 42, 5, p. 377-404 28 p.

Research output: Contribution to journalReview article

Evolution of function in (β/α)8-barrel enzymes

Gerlt, J. A. & Raushel, F. M., Apr 2003, In : Current Opinion in Chemical Biology. 7, 2, p. 252-264 13 p.

Research output: Contribution to journalReview article

Functional Genomics of P450s

Schuler, M. A. & Werck-Reichhart, D., Nov 24 2003, In : Annual Review of Plant Biology. 54, p. 629-667 39 p.

Research output: Contribution to journalReview article

How to Find "missing" Genes

Gerlt, J. A., Dec 2003, In : Chemistry and Biology. 10, 12, p. 1141-1142 2 p.

Research output: Contribution to journalReview article