Research output per year
Research output per year
- 1 - 50 out of 199 results
Search results
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2025
Activatable Porphyrin-Based Sensors, Photosensitizers and Combination Therapeutics
Bandyopadhyay, S., Forzano, J. A., Dirak, M. & Chan, J., Jan 27 2025, In: JACS Au. 5, 1, p. 42-54 13 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Dissecting Large-Scale Structural Transitions in Membrane Transporters Using Advanced Simulation Technologies
Pant, S., Dehghani-Ghahnaviyeh, S., Trebesch, N., Rasouli, A., Chen, T., Kapoor, K., Wen, P. C. & Tajkhorshid, E., Apr 17 2025, In: Journal of Physical Chemistry B. 129, 15, p. 3703-3719 17 p.Research output: Contribution to journal › Review article › peer-review
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Light Color Regulation of Photosynthetic Antennae Biogenesis in Marine Phytoplankton
Kehoe, D. M., Biswas, A., Chen, B., Dufour, L., Grébert, T., Haney, A. M., Joseph, K. L., Kumarapperuma, I., Nguyen, A. A., Ratin, M., Sanfilippo, J. E., Shukla, A., Garczarek, L., Yang, X., Schluchter, W. M. & Partensky, F., Feb 28 2025, In: Plant & cell physiology. 66, 2, p. 168-180 13 p.Research output: Contribution to journal › Review article › peer-review
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2024
Architecture of full-length type I modular polyketide synthases revealed by X-ray crystallography, cryo-electron microscopy, and AlphaFold2
Bagde, S. R. & Kim, C.-Y., Mar 19 2024, In: Natural Product Reports. 41, 8, p. 1219-1234 16 p.Research output: Contribution to journal › Review article › peer-review
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Biotin protein ligase as you like it: Either extraordinarily specific or promiscuous protein biotinylation
Cronan, J. E., Apr 2024, In: Proteins: Structure, Function and Bioinformatics. 92, 4, p. 435-448 14 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Emerging roles of RNA-binding proteins in fatty liver disease
Adesanya, O., Das, D. & Kalsotra, A., Mar 2024, In: Wiley interdisciplinary reviews. RNA. 15, 2, e1840.Research output: Contribution to journal › Review article › peer-review
Open Access -
Lipoic acid attachment to proteins: stimulating new developments
Cronan, J. E., Jun 2024, In: Microbiology and Molecular Biology Reviews. 88, 2Research output: Contribution to journal › Review article › peer-review
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Nanodiscs for the study of membrane proteins
Denisov, I. G. & Sligar, S. G., Aug 2024, In: Current Opinion in Structural Biology. 87, 102844.Research output: Contribution to journal › Review article › peer-review
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Optical imaging probes for selective detection of butyrylcholinesterase
Dirak, M., Chan, J. & Kolemen, S., Feb 7 2024, In: Journal of Materials Chemistry B. 12, 5, p. 1149-1167 19 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Targeting neuraminidase: the next frontier for broadly protective influenza vaccines
Wu, N. C. & Ellebedy, A. H., Jan 2024, In: Trends in Immunology. 45, 1, p. 11-19 9 p.Research output: Contribution to journal › Review article › peer-review
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Unsaturated fatty acid synthesis in bacteria: Mechanisms and regulation of canonical and remarkably noncanonical pathways
Cronan, J. E., Mar 2024, In: Biochimie. 218, p. 137-151 15 p.Research output: Contribution to journal › Review article › peer-review
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2023
Activity-based bioluminescence probes for in vivo sensing applications
Yadav, A. K. & Chan, J., Jun 2023, In: Current Opinion in Chemical Biology. 74, 102310.Research output: Contribution to journal › Review article › peer-review
Open Access -
Activity-Based Photoacoustic Probes for Detection of Disease Biomarkers beyond Oncology
Lee, M. C., Landers, K. & Chan, J., Jun 21 2023, In: ACS Bio and Med Chem Au. 3, 3, p. 223-232 10 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Bacteria in Fluid Flow
Padron, G. C., Shuppara, A. M., Palalay, J. J. S., Sharma, A. & Sanfilippo, J. E., Apr 2023, In: Journal of bacteriology. 205, 4Research output: Contribution to journal › Review article › peer-review
Open Access -
How an overlooked gene in coenzyme a synthesis solved an enzyme mechanism predicament
Cronan, J. E., Jun 2023, In: Molecular Microbiology. 119, 6, p. 687-694 8 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Leveraging coordination chemistry to visualize metal ions via photoacoustic imaging
Swartchick, C. B. & Chan, J., Jun 2023, In: Current Opinion in Chemical Biology. 74, 102312.Research output: Contribution to journal › Review article › peer-review
Open Access -
License to Clump: Secretory IgA Structure-Function Relationships Across Scales
Hockenberry, A., Slack, E. & Stadtmueller, B. M., Sep 15 2023, In: Annual review of microbiology. 77, p. 645-668 24 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
RUNX3 Meets the Ubiquitin-Proteasome System in Cancer
Toska, A., Modi, N. & Chen, L.-F., Mar 2023, In: Cells. 12, 5, 717.Research output: Contribution to journal › Review article › peer-review
Open Access -
Structures of the intermediates in the catalytic cycle of mitochondrial cytochrome c oxidase
Wikström, M., Gennis, R. B. & Rich, P. R., Apr 1 2023, In: Biochimica et Biophysica Acta - Bioenergetics. 1864, 2, 148933.Research output: Contribution to journal › Review article › peer-review
Open Access -
The acyl carrier proteins of lipid synthesis are busy having other affairs
Cronan, J. E., Jun 2023, In: Biochemical Journal. 480, 12, p. 855-873 19 p.Research output: Contribution to journal › Review article › peer-review
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The discovery, function, and regulation of epithelial splicing regulatory proteins (ESRP) 1 and 2
Derham, J. M. & Kalsotra, A., Jun 2023, In: Biochemical Society transactions. 51, 3, p. 1097-1109 13 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
The RGG motif proteins: Interactions, functions, and regulations
Chowdhury, M. N. & Jin, H., Jan 1 2023, In: Wiley Interdisciplinary Reviews: RNA. 14, 1, e1748.Research output: Contribution to journal › Review article › peer-review
Open Access -
Two neglected but valuable genetic tools for Escherichia coli and other bacteria: In vivo cosmid packaging and inducible plasmid replication
Cronan, J. E., Dec 2023, In: Molecular Microbiology. 120, 6, p. 783-790 8 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
2022
Advances in the Structural Biology, Mechanism, and Physiology of Cyclopropane Fatty Acid Modifications of Bacterial Membranes
Cronan, J. E. & Luk, T., Jun 2022, In: Microbiology and Molecular Biology Reviews. 86, 2Research output: Contribution to journal › Review article › peer-review
Open Access -
Convergent and divergent biosynthetic strategies towards phosphonic acid natural products
Ju, K. S. & Nair, S. K., Dec 2022, In: Current Opinion in Chemical Biology. 71, 102214.Research output: Contribution to journal › Review article › peer-review
Open Access -
Mechanism of Action of Ribosomally Synthesized and Post-Translationally Modified Peptides
Ongpipattanakul, C., Desormeaux, E. K., Dicaprio, A., Van Der Donk, W. A., Mitchell, D. A. & Nair, S. K., Sep 28 2022, In: Chemical reviews. 122, 18, p. 14722-14814 93 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Precise modulation of embryonic development through optogenetics
Fan, H., Barnes, C., Hwang, H., Zhang, K. & Yang, J., Dec 2022, In: Genesis (United States). 60, 10-12, e23505.Research output: Contribution to journal › Review article › peer-review
Open Access -
RadicalSAM.org: A Resource to Interpret Sequence-Function Space and Discover New Radical SAM Enzyme Chemistry
Oberg, N., Precord, T. W., Mitchell, D. A. & Gerlt, J. A., Feb 16 2022, In: ACS Bio and Med Chem Au. 2, 1, p. 22-35 14 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Targeted contrast agents and activatable probes for photoacoustic imaging of cancer
Zhao, Z., Swartchick, C. B. & Chan, J., Feb 7 2022, In: Chemical Society Reviews. 51, 3, p. 829-868 40 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
The expanding role of split protein complementation in opsin-free optogenetics
Skeeters, S. S., Camp, T., Fan, H. & Zhang, K., Aug 2022, In: Current Opinion in Pharmacology. 65, 102236.Research output: Contribution to journal › Review article › peer-review
Open Access -
2021
ACE2-Based Decoy Receptors for SARS Coronavirus 2
Jing, W. & Procko, E., Sep 2021, In: Proteins. 89, 9, p. 1065-1078 14 p.Research output: Contribution to journal › Review article › peer-review
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Advances in Activity-Based Sensing Probes for Isoform-Selective Imaging of Enzymatic Activity
Gardner, S. H., Reinhardt, C. J. & Chan, J., Mar 1 2021, In: Angewandte Chemie - International Edition. 60, 10, p. 5000-5009 10 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Biotin, a universal and essential cofactor: Synthesis, ligation and regulation
Sirithanakorn, C. & Cronan, J. E., Jul 1 2021, In: FEMS Microbiology Reviews. 45, 4, fuab003.Research output: Contribution to journal › Review article › peer-review
Open Access -
Carbon dioxide transport across membranes
Michenkova, M., Taki, S., Blosser, M. C., Hwang, H. J., Kowatz, T., Moss, F. J., Occhipinti, R., Qin, X., Sen, S., Shinn, E., Wang, D., Zeise, B. S., Zhao, P., Malmstadt, N., Vahedi-Faridi, A., Tajkhorshid, E. & Boron, W. F., Apr 6 2021, In: Interface Focus. 11, 2, 20200090.Research output: Contribution to journal › Review article › peer-review
Open Access -
Cation-π Interactions and their Functional Roles in Membrane Proteins: Cation-π interactions in membrane proteins
Infield, D. T., Rasouli, A., Galles, G. D., Chipot, C., Tajkhorshid, E. & Ahern, C. A., Aug 20 2021, In: Journal of Molecular Biology. 433, 17, 167035.Research output: Contribution to journal › Review article › peer-review
Open Access -
Classical molecular dynamics
Brooks, C. L., Case, D. A., Plimpton, S., Roux, B., Van Der Spoel, D. & Tajkhorshid, E., Mar 14 2021, In: Journal of Chemical Physics. 154, 10, 0045455.Research output: Contribution to journal › Review article › peer-review
Open Access -
Deep Mutational Scanning of Viral Glycoproteins and Their Host Receptors
Narayanan, K. K. & Procko, E., Apr 9 2021, In: Frontiers in Molecular Biosciences. 8, 636660.Research output: Contribution to journal › Review article › peer-review
Open Access -
Discovery of new enzymatic functions and metabolic pathways using genomic enzymology web tools
Zallot, R., Oberg, N. & Gerlt, J. A., Jun 2021, In: Current Opinion in Biotechnology. 69, p. 77-90 14 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Discovery of novel pathways for carbohydrate metabolism
Stack, T. M. M. & Gerlt, J. A., Apr 2021, In: Current Opinion in Chemical Biology. 61, p. 63-70 8 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Escherichia coli amino acid auxotrophic expression host strains for investigating protein structure-function relationships
Iwasaki, T., Miyajima-Nakano, Y., Fukazawa, R., Lin, M. T., Matsushita, S.-I., Hagiuda, E., Taguchi, A. T., Dikanov, S. A., Oishi, Y. & Gennis, R. B., Apr 1 2021, In: Journal of Biochemistry. 169, 4, p. 387-394 8 p.Research output: Contribution to journal › Review article › peer-review
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Nanodiscs: A toolkit for membrane protein science
Sligar, S. G. & Denisov, I. G., Feb 2021, In: Protein Science. 30, 2, p. 297-315 19 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
New developments in RiPP discovery, enzymology and engineering
Montalbán-López, M., Scott, T. A., Ramesh, S., Rahman, I. R., van Heel, A. J., Viel, J. H., Bandarian, V., Dittmann, E., Genilloud, O., Goto, Y., Grande Burgos, M. J., Hill, C., Kim, S., Koehnke, J., Latham, J. A., Link, A. J., Martínez, B., Nair, S. K., Nicolet, Y. & Rebuffat, S. & 16 others, , 2021, In: Natural Product Reports. 38, 1, p. 130-239 110 p.Research output: Contribution to journal › Review article › peer-review
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New directions of activity-based sensing forin vivoNIR imaging
East, A. K., Lucero, M. Y. & Chan, J., Mar 14 2021, In: Chemical Science. 12, 10, p. 3393-3405 13 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Steering Molecular Activity with Optogenetics: Recent Advances and Perspectives
Oh, T. J., Fan, H., Skeeters, S. S. & Zhang, K., May 2021, In: Advanced Biology. 5, 5, 2000180.Research output: Contribution to journal › Review article › peer-review
Open Access -
The Escherichia coli FadR transcription factor: Too much of a good thing?
Cronan, J. E., Jun 2021, In: Molecular Microbiology. 115, 6, p. 1080-1085 6 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
2020
Acoustic-based chemical tools for profiling the tumor microenvironment
Yadav, A. K., Hernandez, S., Su, S. & Chan, J., Aug 2020, In: Current Opinion in Chemical Biology. 57, p. 114-121 8 p.Research output: Contribution to journal › Review article › peer-review
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Cellular and molecular basis of liver regeneration
Bangru, S. & Kalsotra, A., Apr 2020, In: Seminars in Cell and Developmental Biology. 100, p. 74-87 14 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Computational Dissection of Membrane Transport at a Microscopic Level
Jiang, T., Wen, P. C., Trebesch, N., Zhao, Z., Pant, S., Kapoor, K., Shekhar, M. & Tajkhorshid, E., Mar 2020, In: Trends in Biochemical Sciences. 45, 3, p. 202-216 15 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Lipid Rafts, Sphingolipids, and Ergosterol in Yeast Vacuole Fusion and Maturation
Hurst, L. R. & Fratti, R. A., Jul 3 2020, In: Frontiers in Cell and Developmental Biology. 8, 539.Research output: Contribution to journal › Review article › peer-review
Open Access -
Natural product biosynthesis: What’s next? An introduction to the JBC Reviews Thematic Series
Nair, S. K. & Jez, J. M., Jan 10 2020, In: Journal of Biological Chemistry. 295, 2, p. 335-336 2 p.Research output: Contribution to journal › Review article › peer-review
Open Access