RAD-seq genotypes for a Miscanthus sinensis diversity panel

  • Lindsay V. Clark (Creator)
  • Maria Stefanie Dwiyanti (Creator)
  • Kossonou G. Anzoua (Creator)
  • Joe E. Brummer (Creator)
  • Katarzyna Glowacka (Creator)
  • Megan Hall (Creator)
  • Kweon Heo (Creator)
  • Xiaoli Jin (Creator)
  • Alexander Edward Lipka (Creator)
  • Junhua Peng (Creator)
  • Toshihiko Yamada (Creator)
  • Ji Hye Yoo (Creator)
  • Chang Yeon Yu (Creator)
  • Hua Zhao (Creator)
  • Stephen P Long (Creator)
  • Erik J Sacks (Creator)

Dataset

Description

Genotype calls are provided for a collection of 583 Miscanthus sinensis clones across 1,108,836 loci mapped to version 7 of the Miscanthus sinensis reference genome. Sequence and alignment information for all unique RAD tags is also provided to facilitate cross-referencing to other genomes.
Date made availableJul 27 2019
PublisherUniversity of Illinois at Urbana-Champaign

Keywords

  • variant call format (VCF)
  • bioenergy
  • restriction site-associated DNA sequencing (RAD-seq)
  • grass
  • sequence alignment/map format (SAM)
  • miscanthus
  • single nucleotide polymorphism (SNP)

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