RAD-seq genotypes for a Miscanthus sinensis diversity panel

  • Lindsay V. Clark (Creator)
  • Maria S. Dwiyanti (Creator)
  • Kossonou Guillaume Anzoua (Creator)
  • Joe E. Brummer (Creator)
  • Katarzyna Głowacka (Creator)
  • Megan Hall (Creator)
  • Kweon Heo (Creator)
  • Xiaoli Jin (Creator)
  • Alexander Edward Lipka (Creator)
  • Junhua Peng (Creator)
  • Toshihiko Yamada (Creator)
  • Ji Hye Yoo (Creator)
  • Chang Yeon Yu (Creator)
  • Hua Zhao (Creator)
  • Stephen P Long (Creator)
  • Erik J Sacks (Creator)

Dataset

Description

Genotype calls are provided for a collection of 583 Miscanthus sinensis clones across 1,108,836 loci mapped to version 7 of the Miscanthus sinensis reference genome. Sequence and alignment information for all unique RAD tags is also provided to facilitate cross-referencing to other genomes.
Date made availableJul 27 2019
PublisherUniversity of Illinois at Urbana-Champaign

Keywords

  • variant call format (VCF)
  • sequence alignment/map format (SAM)
  • miscanthus
  • single nucleotide polymorphism (SNP)
  • restriction site-associated DNA sequencing (RAD-seq)
  • bioenergy
  • grass

Cite this

Clark, L. V. (Creator), Dwiyanti, M. S. (Creator), Anzoua, K. G. (Creator), Brummer, J. E. (Creator), Głowacka, K. (Creator), Hall, M. (Creator), Heo, K. (Creator), Jin, X. (Creator), Lipka, A. E. (Creator), Peng, J. (Creator), Yamada, T. (Creator), Yoo, J. H. (Creator), Yu, C. Y. (Creator), Zhao, H. (Creator), Long, S. P. (Creator), Sacks, E. J. (Creator) (Jul 27 2019). RAD-seq genotypes for a Miscanthus sinensis diversity panel. University of Illinois at Urbana-Champaign. 10.13012/B2IDB-1402948_V1